| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2940 |
|---|
| Symbol | |
|---|
| ID | 3836384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3388714 |
|---|
| End bp | 3389652 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637827055 |
|---|
| Product | glycine cleavage T protein (aminomethyl transferase) |
|---|
| Protein accession | YP_428024 |
|---|
| Protein GI | 83594272 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.352014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTG CCGACCCTTC CGCCGTCAGC CCGCCGGTGC TGTGCCCCCG CCCCGATCGC
GGCGTTCTCG GCCTAAGCGG CGCGGACCGC GTGAGCTTCC TTCAGGGGTT GGTCTCCAAT
GACGTGACCC GGGCCGGACC GGAACAGGCG TTATGGGCGG CATTCCTCAC CCCCCAGGGC
AAATATCTCC ATGATTTCTT CGTCGTTTCC GTTGGCGAGG GGGAAAGCGC CCGCTTGCTG
CTGGTCGGCG AGGCGGCCCG CCTGGAAGAC CTGCGCGCCC GCCTGTCGCG CTACCGCCTG
CGCTCGAAGG TCACCCTCGA TCTTGCCGGC GGTTGGACGG TGGCGGTGAT CCCCGGCCGC
AACGCGGCGG CCAGCCTGGG TTTACCCGAT CGGCCGGGGG CGATGCGCGC CCTTGATGGC
GGCGGCCTCG CCTTCGTCGA TCCCCGGCTG AGCGCGGCGG GCGTTCACCT GCTGCTGCCC
GAAGCGGCCG CCAAGCCGCC TTTGCCCCTC GGCGAGGAAA GCCTGTGGCA GGCCCATCGC
TTAGCCCTGG GCCTGCCCGA GGGCAGCGAC GACCTTGAGC CCGAAAAGGC CCTGCTTCTG
GAAAACGGCT TCGAGGAACT GGGCGGCGTG GACTTCAAGA AGGGCTGTTA CATGGGCCAG
GAACTGACGG CGCGGACCAA ATACCGCGGC CTCGTCAAAA AACGCCTGAT CCCCGTCGCC
ATCGACGGCC CCCTGCCCGC CCCGGGCAGC GCGCTGCGCA CCGGGGAAGG CCTGGACGCC
GGAGAGATGC GCTCGGGTCT GGTGCGCGCC GATGGCCAGA CCCTCGGCCT CGCCCTGCTC
CGCCTCGCCC GCCTCGGCGG CCCGATCCTC GCCGAGGATG GCGGCGCCAC CCTGACACCG
TCGATCCCGT CGTGGATGAT CATCCCAACG GCGGAGTGA
|
|---|
| Protein sequence | MTPADPSAVS PPVLCPRPDR GVLGLSGADR VSFLQGLVSN DVTRAGPEQA LWAAFLTPQG
KYLHDFFVVS VGEGESARLL LVGEAARLED LRARLSRYRL RSKVTLDLAG GWTVAVIPGR
NAAASLGLPD RPGAMRALDG GGLAFVDPRL SAAGVHLLLP EAAAKPPLPL GEESLWQAHR
LALGLPEGSD DLEPEKALLL ENGFEELGGV DFKKGCYMGQ ELTARTKYRG LVKKRLIPVA
IDGPLPAPGS ALRTGEGLDA GEMRSGLVRA DGQTLGLALL RLARLGGPIL AEDGGATLTP
SIPSWMIIPT AE
|
|---|
| |