| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2925 |
|---|
| Symbol | |
|---|
| ID | 3836366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3367455 |
|---|
| End bp | 3368732 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637827037 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_428009 |
|---|
| Protein GI | 83594257 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGG ACCAAGCGCC CGCGCCTTTG GAAAAGGACT CTGTGATCAT GATGTCCGAT
CCCGGCGAGG GGCGATGGCG GCTGCGCTTC TGGACGATTT TCGGCGGGCA GGTCCTCTCG
CTCTGCGGCT CGTCGCTGAC CCAGTTCGTC CTGATGTGGT GGATCGCCGA TACGACGGGC
AGTGTCGCGG CGCTGTCGGT GGCGGGCCTT GCCGCCCTGC TGCCCCATGC CCTCTTCAGC
CCGCTGGGAG GGGTTCTTGC CGACCGTTAC AGCCGGCGGG TTTTGATGGC CTTGACGGAC
ATCGTCAGCG CGCTGTGCAT GGTCGTGTTG ATCGCCCTGT TCCTGACGGA GCGGGTGGAG
ATGTGGCATG TCTATCTGAT GATGGCGATC CGTGGGGCCA TGCAGGCGCT TCAGGAGCCG
GCGGCGGTCG CCTCCCTGGG AATGCTGGTG CCGCGCTCGT TCCTTTCCCG GGTCGGCGGC
CTGCAACAAA CCCTGCAAAG CATGACGCAG GTGGTCGCCG CTCCCCTTGG CGCGCTGGCG
ATGAGCGTGC TGCCGCTGGG GTGGGCCCTC AGCATCGATG TCGTCACCGC CCTGTTCGGC
ATCGTCCCGT TGCTGATCTT CCGGATCCCC CAAAACCAAA TTCCCGCCGG GGAGCGGACC
GGCGTCTGGC GGGAGTTTCG TGACGGGATC GGTCTGGTAC GGCGGTCGCG GGGCCTGAGG
CACCTGTTTT TGCTGCTCGC CGTCGGCTTG TTGGCCGTCA TGCCATCGCT CATGCTGGTT
CCCTTGCTGG TGAAGGAGCA TTTCGGCGGC GGAGCCGGCG AGGTGGCGCT GATGGAGGGA
CTATCGGGGT TTGGCATGAT CGCTGGCGGC ATGATCGTGA CGGCGTTCGC GCCGCGGCGG
CAGGTTCCCT GGGTGTTGTG GGGCATGTCC CTGTCGTGTC TGACGCTGGC CTTGACCGGT
TTGGCGCCCG CCGGCTTGTT CGGCGTCGCC GTCCTGTGGT GGGTCCTCAG CGGTTTGACC
TACTCGCTGA GCGCGGCTCC CTGCATGACG CTGCTGCAGA TGGTCGTTCC CAACCATCTG
CTGGGGCGGA CGCAATCCCT GCTCAACACG ATGCTGAGCC TCGCCGCCCC CGTGGGGCTG
GTCATCACCG CGCTGTTGAG CGCCCAGGTC GACGTGCGCG CCCTGTTCGT CATGACCGGG
GCCTTCGCGG CGATCGTGAC CGCCCTGGGA TTCCTATCGC CCGCCCTGAT GACGCTGGAG
GACACGCCGC CGCGCTGA
|
|---|
| Protein sequence | MNADQAPAPL EKDSVIMMSD PGEGRWRLRF WTIFGGQVLS LCGSSLTQFV LMWWIADTTG
SVAALSVAGL AALLPHALFS PLGGVLADRY SRRVLMALTD IVSALCMVVL IALFLTERVE
MWHVYLMMAI RGAMQALQEP AAVASLGMLV PRSFLSRVGG LQQTLQSMTQ VVAAPLGALA
MSVLPLGWAL SIDVVTALFG IVPLLIFRIP QNQIPAGERT GVWREFRDGI GLVRRSRGLR
HLFLLLAVGL LAVMPSLMLV PLLVKEHFGG GAGEVALMEG LSGFGMIAGG MIVTAFAPRR
QVPWVLWGMS LSCLTLALTG LAPAGLFGVA VLWWVLSGLT YSLSAAPCMT LLQMVVPNHL
LGRTQSLLNT MLSLAAPVGL VITALLSAQV DVRALFVMTG AFAAIVTALG FLSPALMTLE
DTPPR
|
|---|
| |