Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2880 |
Symbol | |
ID | 3836320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3318121 |
End bp | 3320748 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637826991 |
Product | hypothetical protein |
Protein accession | YP_427964 |
Protein GI | 83594212 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.91223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGCG TTAATCTTCC CGCCCAGCCT GCCGAAGGCA AGGCCGAGAC CCCTCCCCAT TGGACATCGG GCATCGTCGC CGTTTTGGCG GCGCGGCGCC ATGCCCTGGC CTCGGCGGCC GGCGTGGTGG TGCTGGCCGT GTTGTCCTTC GCCATCTACC ACATGGCGCG CGAGGTGGAT TTCCAGGATG TTCTGGCCGC CCTGCGCGGC ACGCCCTGGC ATGCCGTGGG ATGGGCCGTT CTGCTGACGG CGGTCAGTTT TTTGTCGCTA AGCGTCTATG ACGTCGAAGC CCTGGCCCAT ATCGGCCATA AGGTGCCCTA TCCGGTGGTC GCCCTGACCT CGTTTTGTTC CTATGCGGTG GGCAATACCG CCGGCTTTGG TCCCTTGACC GGCGGGGCCA TCCGCTTCCG CTTCTACGCG CCGATGGGGC TGGAGCCCGA ATGCGTCGGC AAGGTGGTGG TTTTCGTCAC CGCCGCCTTC GGTCTGGGGC TGACCGCCGT TACCGCCCTC AGCTTGCTGG TCGCCGCCGA CGACGTGGCC GGGGTGCTGT CGCTGCCACC CCTGGCGCTG CAGGGTGGGG CCGTTCTGGC GATCGGCGGC CTGCTGGCCC TGGTCGTCCG CGCTTCGCGC CCGGAAAGCA AGGTGGCGCT GGGCCGCGTC GCCCTGCGCC TGCCGCGACC GCGCATCATG CTTGGCCAAT TCGCCGCCAC GGCCGTGGAT ATCGTCGCCT GCGCCGGTAT CCTTTGGGTG TTGCTGCCCG AGATCGGCCT GGGCTTCCCC GCCTTCGTCA CCCTTTACGC CGTGGCCATC GGCCTGGGCG TACTCAGCCA TGTTCCGGCC GGTCTGGGGG TTTTCGAAAC CATCATGATC GCCACCCTCG GCCGCCTCGC GCCGATGGAC CAGATCCTGG GCGCCCTGGT GCTCTACCGG GTGATCTATC ATATCTTGCC GCTGCTGCTC GCCACCGTGC TGGTCAGCAT CGTCGAGACC CGCCGGGCGA TGGCCGGCCC CGCCGCCTCG AAGGTGGTGC GCTCGGCCAG CCAGATGGCG CCGCCGGTGA TTTCGGCGAT GACGCTGGTT CTGGGCGCCA TGCTGATCTT CTCGGGCGTC ACCCCGGCCC TGCCGGGCGA TCTCGATATC CTTGACGCCT GGATCGCGCT GCCGATCGTT GAAAGCGCCC ATTTCCTGGC CAGCGTTCTT GGGCTGGCCC TGGTGATCGT CGCCCGGGGT CTGGCCTTCC GCTTGGACGG CGCGTGGTGG GCGGCGATCG CCGCCGCCGC CCTCGCCGTG GTGCTGTCGG TGCTCAAGGC GGTGGCCCTG GGCGAGGCGA TCGTGCTGTC GGTTCTGGTG CTGGCCCTGC TGGCGACCCG GGCCGAATTC TCGCGACCGG CCTCCCTGCT CCACCAAACC CTGACCCCGC CCTGGCTGGC GGCCATCGCC ACCATCGTCA TCTCGGCCTT CGTGCTGTTG TTCCTCACCT ATCAGGGGGT GGACTACACC GATGACCTGT GGTGGCAGTT CGAGATTTCC AACGAGGCGC CGCGTTCGTT GCGCGCCCTG CTCGCCGTCA GCCTGGGGGC CGGATCCTTC GCCATCTGGA ACCTGCTGCG CCCGGCGCCC GGCCGCACCC ATCTGCCCTC CCCCCAGGAG ATCGACCGCG CCCTGGCCAT CCTTGAAACC CAGCCGATGG CGGCGGCCAA TCTGCTGCGC ATGGGCGACA AAAGCCTGAT GTTCTCCGAA GACGGCAAGG CCTTCATCAT GTATGGCCGG CAAGGCCGCT CGTGGGTGGC GCTGTTTGAT CCCGTGGGCG CGCGCGACTC CTGGCCCGAA CTGGTCTGGC GTTTCGTGGA GACCGCCCGC GCCTCGGGCG GGCGGGCGGC CTTTTATCAG GTGGTCCCGG AAAATCTGGC GCTTTACGCC GATGCCGGTC TTTCGGCCTT CAAGCTGGGC GAGGAGGCGC GCATTCCCTT GGCCGATTTC TCGCTCAGCG GCTCCAAGCG CTATGGCCTG CGCCAGACCG TCAGCCGCTG CAGCCGCGAC GGGCTGGTCT TTTCCCTGTT AAGCCCCGAT GAGATCGCCG CCGAGATGGA CCGCCTGGAA GAGATCTCGG ACGCTTGGCT GGCCAGCCAT CGGGCCCGCG AGAAGCGCTT TTCGCTGGGC GCCTTCGATC GCTCCTATGT GCAAAGCCAA ACGGTCGCCG TGCTGCGCCG GGCCGATCAG ATCGTCGCCT TCGCCACCGT GATGACCACC GCCCTGACCG AGGAGGCCAC CATCGATCTG ATGCGCTTTG ACGACGAGGC GCCGCGCTCG GCGATGGAAT TCCTGTTCAT CCGCCTGATG GAGCATTTCA AGGCGGCCGG CTATGACCGC CTCCACCTGG GCATGGCGCC GCTATCGGGG CTGTCGTCAA GCCCGGCGGC GCCCTTCTGG CACCGGGTGG GCCGGGCGGT CTTCGAGCAC GGCGAACGCT TTTACAATTT CCAGGGATTG CGCGCCTTCA AGGCGAAATT CCAGCCCGAA TGGCAACCGC GCTACCTGGC TGTCGCCGGC GGCCTCAACC CCGCTCTCGC CCTCGCCGAC ATCGCCACAC TGATTGGCGG CGGCCTGAAA GGAGTGGTCG GAAAATGA
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Protein sequence | MDGVNLPAQP AEGKAETPPH WTSGIVAVLA ARRHALASAA GVVVLAVLSF AIYHMAREVD FQDVLAALRG TPWHAVGWAV LLTAVSFLSL SVYDVEALAH IGHKVPYPVV ALTSFCSYAV GNTAGFGPLT GGAIRFRFYA PMGLEPECVG KVVVFVTAAF GLGLTAVTAL SLLVAADDVA GVLSLPPLAL QGGAVLAIGG LLALVVRASR PESKVALGRV ALRLPRPRIM LGQFAATAVD IVACAGILWV LLPEIGLGFP AFVTLYAVAI GLGVLSHVPA GLGVFETIMI ATLGRLAPMD QILGALVLYR VIYHILPLLL ATVLVSIVET RRAMAGPAAS KVVRSASQMA PPVISAMTLV LGAMLIFSGV TPALPGDLDI LDAWIALPIV ESAHFLASVL GLALVIVARG LAFRLDGAWW AAIAAAALAV VLSVLKAVAL GEAIVLSVLV LALLATRAEF SRPASLLHQT LTPPWLAAIA TIVISAFVLL FLTYQGVDYT DDLWWQFEIS NEAPRSLRAL LAVSLGAGSF AIWNLLRPAP GRTHLPSPQE IDRALAILET QPMAAANLLR MGDKSLMFSE DGKAFIMYGR QGRSWVALFD PVGARDSWPE LVWRFVETAR ASGGRAAFYQ VVPENLALYA DAGLSAFKLG EEARIPLADF SLSGSKRYGL RQTVSRCSRD GLVFSLLSPD EIAAEMDRLE EISDAWLASH RAREKRFSLG AFDRSYVQSQ TVAVLRRADQ IVAFATVMTT ALTEEATIDL MRFDDEAPRS AMEFLFIRLM EHFKAAGYDR LHLGMAPLSG LSSSPAAPFW HRVGRAVFEH GERFYNFQGL RAFKAKFQPE WQPRYLAVAG GLNPALALAD IATLIGGGLK GVVGK
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