Gene Rru_A2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2855 
Symbol 
ID3836295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3287041 
End bp3289854 
Gene Length2814 bp 
Protein Length937 aa 
Translation table11 
GC content66% 
IMG OID637826966 
Producthypothetical protein 
Protein accessionYP_427939 
Protein GI83594187 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG3063] Tfp pilus assembly protein PilF
[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCA GCCGCCTGCG GCCGACCTCT CCGCTGGTTC GCCAAGCGGC GGCTTGCCTG 
GATGCCGGAG AGGCCGATCA TGCCGATGTT CTTCTTGATC TTCACCTGTC GCGCCATCCC
GAGGACTCCG CCGGGCTGAT CCTGTTCGGT TTGACCCGGG TCGCCCTTGG GCGCCCCCTG
GAAGCCGAGC AGCCGCTGCG CCGGGCCCTC GCCCTTGATC CCATCGATGA TCCCTTTCAT
GCCCGCGCCG TCTGTGCGCT GGTCGATGTT CTCAAGGCCC AGGGGCGGAT GGCCGAGGTC
TCCGAGGTTT TGGAGCGGGC GGGGGATGTC GCCCCGATGA ACGCGGTGTT TCCCCGCATG
CTCGGCGCCC ATTACCGGGC CCTGGGGCAG GTGGGGGCGG CGATCACGGC GGCGCGCCGC
GCCGTGGCCG TGGAGTCCGC TGATGGCGAG AATTGGCGGG GGTTGGCCGC CACCTTGCTG
GGCGGCGCTC CAGGCGAGGC GCTTGAGGCC CTGGAGCGGG CGAAGACCTG CGGCGACGAC
GGCGCCGACT GGTGGAATAT CCGCGGCGTC GCCCTGGCGG CCTTGGGCGA GGGCGAGGCG
GCGCGGGAGG CCTTCAAAAA CGCCATCCTG CGCGATGGCG CCGCGCCGAT GGCCTGGACC
AATCTCGGCA ATCTCGAAAT CCGCGCCGCG CGCTCGGCCG ACGCCCTGGA GCGCGCCGTC
GAGGCCTATG GTCAGGCCAT CCGTCGCGCC CCCGATAGCT TCGAGGCCCA CAACAATCTG
GCCCAGGCCC TGCGCGATCT GGGCCGGCGC GACGAGGCCC TGGTCCATGC CGAGCGGGCG
GCGTCGTTGC GTCCGCACGA TGTGACCGTG CTCAACACCC AGGCCAATAT CCTGCGCGGC
CTGAGGCGGG TTGACGAGGC CGTGGCGATT CTGGAACGCG CCCTGGCGTG TGATGGCCGT
TCGGCGGAAA CCCACAGCAA TCTGGGGCTG GCCCTGCTCG CCGCCCAGGA TCGCCAGAGG
GCGGAGGAGC ATTTCCGCAA GGCGGCGGCT CTGGCGCCCG ATTGCGTGGA TATCATCGTC
AACCTCGCCT GCTTTCTCAT TCACATCAAT GCCGGCAAGG AGGTTCTTGG CGTTCTGGAA
CCGGCGCTCG CGCGGTTTCC CGGCGATGTG GGGCTTCTTG CCACCCTGGG GCTCCATTAC
TTCCAGGAAA ACGCCTATGA GGACTGCGCG ACGGTTTTCG AGACCGTTCT CGCCAAAAAA
CCCGACCATG TTGAAGCGCG CGCCTCGCTG GGGGTGGTGC GCTGGTCGCA AGGCCGGCTG
GTCGAGTCGC TGGCCCTCGC CCAGTCCATC CGCGAGGATT TTCCCGAGGA TATACGCACC
TTGTTCCTGC TTGGCTGCGT CCATAGCGAC CTGATGGAAA ACGCCTCCGC CCTGGAGGTT
TTCGATCTCG CCGTGGAAAA AGGCGGCGAG CGGGTGCCGC CTTTCCATTA CAGCAATTGC
TGCTTCAGCT TTCATTACGT CGAAGCCATG GAGAAGGACG ATCTTTTCGC CCGCCACCGG
CGCTGGGACG CCCTGTATGG CGCCGGGGCG ACCGAGCTCT CCGATGTCAC CCATCACAAC
ACCCGTGATC CCGAGCGGCG TTTGAGAATC GGCTATGTCT CGCCCGACTT CCGTCGTCAC
TCGGTCGCCT ATTTTTTCCT GCCGCTGGTT GGCGCCCATG ATCGGGCCGC GGTCGAGGTC
ACCTGCTATT CCCTGTCGAC CTTGACCGAT CAGATGACCG ATCTGATCCG CGAGGGCTGC
GACCGCTGGC GCGATATCAC CACCCTGCCG GCGGAAAAGG CGGCCGAGAG GGTGCGCGAG
GACGAAATCG ATATCCTGGT CGATCTCTCG GGCCATACCG CCAACAACGG CCTGTCGATC
TTCGCTCTCA AGCCCGCACC CGTCCAGGTC ACCTATCTGG GCTATCCCAA TACCACCGGG
CTTTCGGCGA TCGATTACCG GCTGACCGAT GGCTTCGCCG ACCCCTTGGG GGTGGACGAG
GATCCGGCTT CGGAAACCCT GTGGCGGTTG CCACGCAGTT TTTTGCTGTT TGACGAGGTA
CCCGGACTGC CCGATCCGGC GCCGCCGCCG GTTCTGAGCC GGGGCACCAT CACCTTCGGC
TCGTTCAATA ATATGGCCAA GGTCAATCGC GGCTGTGTCG CGGTCTGGAA GCGCATCCTC
GATGCGGTGC CGGGAAGCCG GCTGTTGCTC AAGGCCAAGG GGTTCCGCGA TCCCGCCACC
GCCAAGGTCT TGATCGAGCG TCTGATCGAC TGGGGGGTGG ACCCCGAGCA GGTGAGCTAT
GCCCCTTACG CCAAGAACCT GATGGAGCAT GTGGCGGTTT ATGCCGAGGT CGATATCGCG
CTGGACACCT TCCCCTATAA CGGCACCACC ACCACCTTCG AAGCCCTGCA CATGGGCGTA
CCGGTGATCG GCCTGCGCGG CCATCGCCAT TCGGGGCGGG TGGGGGCGAG CATCCTTGGC
AATCTTGGTC TCGCCGATCG TCTGCTTGGC GAGGACGTCG ACGATATGGT GGCCAAGGCG
GTTGCCTTGG CCGGCGATCT GGAGGGATTG ATGCGGATGC GCGCGGGCTT GCGCGAGCGT
CTGCGCGCCT CGCCCTTGCA AGACGGACCC GGCTTCGTGG CCGACCTTGA AGGAGCCTAT
CGCGCCATGT GGCGGCGCTG GTGCGCCGGG CCGCCGACCT TCCACCGCCA ACCAAAGAAT
GGCATGTGGG CGGTCGAGGA AATGGAAGAC GCCATCGAAC CCGTGCTGGG ATGA
 
Protein sequence
MDTSRLRPTS PLVRQAAACL DAGEADHADV LLDLHLSRHP EDSAGLILFG LTRVALGRPL 
EAEQPLRRAL ALDPIDDPFH ARAVCALVDV LKAQGRMAEV SEVLERAGDV APMNAVFPRM
LGAHYRALGQ VGAAITAARR AVAVESADGE NWRGLAATLL GGAPGEALEA LERAKTCGDD
GADWWNIRGV ALAALGEGEA AREAFKNAIL RDGAAPMAWT NLGNLEIRAA RSADALERAV
EAYGQAIRRA PDSFEAHNNL AQALRDLGRR DEALVHAERA ASLRPHDVTV LNTQANILRG
LRRVDEAVAI LERALACDGR SAETHSNLGL ALLAAQDRQR AEEHFRKAAA LAPDCVDIIV
NLACFLIHIN AGKEVLGVLE PALARFPGDV GLLATLGLHY FQENAYEDCA TVFETVLAKK
PDHVEARASL GVVRWSQGRL VESLALAQSI REDFPEDIRT LFLLGCVHSD LMENASALEV
FDLAVEKGGE RVPPFHYSNC CFSFHYVEAM EKDDLFARHR RWDALYGAGA TELSDVTHHN
TRDPERRLRI GYVSPDFRRH SVAYFFLPLV GAHDRAAVEV TCYSLSTLTD QMTDLIREGC
DRWRDITTLP AEKAAERVRE DEIDILVDLS GHTANNGLSI FALKPAPVQV TYLGYPNTTG
LSAIDYRLTD GFADPLGVDE DPASETLWRL PRSFLLFDEV PGLPDPAPPP VLSRGTITFG
SFNNMAKVNR GCVAVWKRIL DAVPGSRLLL KAKGFRDPAT AKVLIERLID WGVDPEQVSY
APYAKNLMEH VAVYAEVDIA LDTFPYNGTT TTFEALHMGV PVIGLRGHRH SGRVGASILG
NLGLADRLLG EDVDDMVAKA VALAGDLEGL MRMRAGLRER LRASPLQDGP GFVADLEGAY
RAMWRRWCAG PPTFHRQPKN GMWAVEEMED AIEPVLG