| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2792 |
|---|
| Symbol | thyX |
|---|
| ID | 3836232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3226427 |
|---|
| End bp | 3227284 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826903 |
|---|
| Product | FAD-dependent thymidylate synthase |
|---|
| Protein accession | YP_427876 |
|---|
| Protein GI | 83594124 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1351] Predicted alternative thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC TGCTTTTCGC CCCCACCGCC ACGGTGGTGG CCCACTCATC GATGGACCCC
GCCGGCCTTG CCGGGTGGGC GGCCGAAATG GGCTATGGCG CCCTGATCGA CGACGCGACG
ACGCCGCTGG GCGATATCGC CCAGGCGTCG ACCGGCGCCG GATCGGCCGA TGTCCTGCCC
GAATTCGCCG GGCGCTTCTG CTACCGCTCG TTCAAGAAGG GCCGGCCGGC CGACGAATAC
GTCGCCCATA TCCTCGACTC GGGCCATGGC TCGGTGCTCG AACATGTCAG CGTGTCCTTC
GCCGTCACCG GCGTCTCGCG CGCCCTGACC CACGAGTTGA TCCGCCACCG CGCCGGCACG
GCGGTCAGCC AGGAAAGCCA GCGCTACGTC GATGCCAAAT CGGTGAATTT CGTCGTGCCG
CCGTTGCTGG TGGCCGAGAT CGACCGCCTG AAAGCCAGCG GCGCGGCCGG CGAAGCCGAC
GCCCTGTGCG CCGAATTCCT GACCGATTGC GAAAGCGCCC TTGGCCGTTA CAAGCGCTGG
CAGGAGTCGT TCCGCGCCCA GGTCGAGGCT TTGGGCGTCA GCGAACCGAC CCTGATCAAG
AAGCGCGCCA ATGAGGCCGC CCGCTGCATC CTGCCCAACG CCACCGAAAC CCGGCTGGTG
TGGACGATGA ACCTGCGCTC GGCCCGCCAT GTGGTGGAAC TGCGCGGCCA TCGCGACGCC
GATCTGGAGA TCCGCCGCCT GTCGTGCCTG CTGGCGCGCA AGATGAAAGA GGTCGCGCCG
CTGGTCTTCG CCGATGTCGG GGTGTTCACC GACAGCGACG GCTTCGAAAG CGTCGGCGTC
GGCCACCACA AGGTTTAA
|
|---|
| Protein sequence | MTELLFAPTA TVVAHSSMDP AGLAGWAAEM GYGALIDDAT TPLGDIAQAS TGAGSADVLP
EFAGRFCYRS FKKGRPADEY VAHILDSGHG SVLEHVSVSF AVTGVSRALT HELIRHRAGT
AVSQESQRYV DAKSVNFVVP PLLVAEIDRL KASGAAGEAD ALCAEFLTDC ESALGRYKRW
QESFRAQVEA LGVSEPTLIK KRANEAARCI LPNATETRLV WTMNLRSARH VVELRGHRDA
DLEIRRLSCL LARKMKEVAP LVFADVGVFT DSDGFESVGV GHHKV
|
|---|
| |