| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2763 |
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| Symbol | |
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| ID | 3836203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3195632 |
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| End bp | 3198094 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637826874 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_427847 |
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| Protein GI | 83594095 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGATCGA TTTCACAGAG TTTGCGCGGG CGTTTTTTGC TGACCGCCCT GGTTCTGGCC
ATCGTCTTGC TGGGAATCTC GGCCTATGGC CAGTCGCTGG TCAAGGCCAT CGGCGCGGAA
AGCCACCGGC AGATCCAAAC CTATTACGGC TCCCACCGGC TGCTTCAAGA GACCAAAACC
GCCCTTGGTC AGGTGGAACG GGCGCTGCAC GAGGCGATGA TCCACCCCGA TGCCATCGGT
TCGGTGCGGG CGGCGGTGGC CGGGCTGAGG GCGGCTGTCG GTCGGCTGAC CAGCGATCCG
ACCTTGGCCG GACAGCCGAT CTTTTCCGGC CTGCCGGCCG CCGTTGACGA GATGAGCACC
CGCCTGGACC GCGACCTGGG GCGATGGAGC CGCGGCGAGG CTGCGGCCCC CGTTGGCCTT
GTCGATGGCT TGCGCGACGT TTTGCACCTG TGCGAAAGGC GGGTTTATGA CGCCATGGTC
GATAAGACCT ATCTCGCTTT GGGCACCTCG GACACGCTGA GCATCATCAT CTGGGGGCTG
ACCGGGGTTA TCTTCCTGAT CGTGCTGGCG GCTTATGGCG TTTTCGAACT GTCGATCCGC
CGACCGGTGT TGCGGGTGGC CGAGGCCCTG CGCGCCGAAG GCCGCGGGGC GGTTGGAGAG
ACCGATGTGC CGATGCCGCG CACCATTGAA ACCTGGCTGC TGGTCGATGC CTTCAATGGC
ATGCGCCTGC AGGTCCATTC CCGGCAGTTG CGGCTGCAAT CGGTTTTGGA AAGCACCAGC
GACGGCATCA TCACCGTCGA TGACAAGGGC AGCATCGAAT CGATCAATGG CGCGGCCGAG
CGGGTGCTGG GGCTGACCAG GGACGAGGCG GTGGGGCGGC CGCTCGGCGA TCTTATTCCC
CTGGACCGGT TGGCCGAAGA CGGGGGCGAG GAGGGGGCGC TTTCCCGGCG GCTTTTGGCC
TTGCGCGGCC GTGAAATCGA TCTGCCGGCG CGGCGGGCCG ATGGCGCGGC CTTTCATCTG
TCGCTCAAGC TCAGCGATTT CATGTTGGGC GAGCGGCGCT ATTTCAATGC CCTGATCGCC
GATGTGACCG ACCGCAAGGC GATGATCGAC CGCCTGACCT TCCTGGCCCA GCGCGATCCG
CTGACCGGGC TGATCAATCG TCGCAGCTTT TTCGATGATC TGGAAAAGGC GGTGGCGCGG
GCCGGCCGAT TCCCGGCGGC CGGGGTGGCG GTAATCAGCA TCGATCTCGA TCGCTTCAAA
TACGTGAACG ATTCCCTTGG TCATCAGGCC GGCGATTGCC TGCTGAAGGA GGTGGCCGAG
GTGCTTTTCG GCCGCCTGCG CGAAACCGAT CTGCTGGCCC GCCTGGGGGG CGACGAATTC
GCCGTGCTGC TCCACGGCGT CAACCGCGAA GGCGCCCTGC ATGTCGCCGA GGCCCTGCGG
CTGTGTTTGG CCGATTACGC CTTTTCCTAT GACGGCAAAT CGGTGGAGAT CGGCTGTTCG
CTGGGCGTCG CCACTTGGGC CGCCGATGTG GACGATCCCG AGGACCTGCT GGCGCGGGCC
GATATGGCGA TGCGGCTGGC CAAACGCGCC GGGCGCAACC GCGTTCATCT GTTCGAGGAG
GGCGACCTGG AAGTCCGCGC CCGGGTGGTG GCCGATGCCG GCTATTCCAA GCTGATCGAT
CGCGGGTTGC GCAACAATCT GTTCCGTCCG GTTTTTCAGC CGATCATTGA TGTGACGAGC
GGGGCAGTGG TCGGCCATGA AACCCTGGCC CGGCTCCATG ATCCGGCGGC GATCGGCCTG
ACCATGGATG TGTTGATTCC CGTCGCCGAA CGCTTCGGTC TGGCCGTGGA GATCGATCGC
CAGATCATCC TGGCGGTGAC CGAGGCCCTG GCCGAGGATG CCGGCTGGCT GGAGGGCGGC
TTCCTGAGCT TCAATCTTTC GGCGCAATCC GTCGGCGATG GACGGATTTT CAGCGCCGTC
CGCCGGCTGA TCGCCACCCG CCGCTTGCCG CCACAGGCGC TGATCTTCGA GATCACCGAA
ACGGCGGCGA TCGCCAGTCT GGCGGCGGCG CGGACTTTCC TCAAGGCCTT GACCGATCTC
GGCTGCAAGA CCGCCCTTGA TGATTTCGGC TCGGGGTATT CCTCGTTCAC CTATCTGCGG
GAGCTGCCGG TGGATTTCCT TAAGATCGAT GGCCGCTATG TGCGCGATAT CCACCACGAC
CCGGTCAAGG CGGCGATGGT CCAGGCGATC AATACGGTTG CCCATGCCAT GGGCATGCGC
ACGATCGCCG AATGCGTCGA GGAGGCGTCG GGTCTGGAGG TTCTGCGCCA AAGCGGTGTC
GACTGCGCCC AGGGCTTCCT GTTTGGCCGA CCGGCGCCGC TGGGGCCGTG GATCGTTCCC
AACCCGATCC CCAAAGGTAT CGGCCGGCCG CGTCTGGCTC TCGTCGCCCC GGAGGGACGG
TGA
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| Protein sequence | MRSISQSLRG RFLLTALVLA IVLLGISAYG QSLVKAIGAE SHRQIQTYYG SHRLLQETKT
ALGQVERALH EAMIHPDAIG SVRAAVAGLR AAVGRLTSDP TLAGQPIFSG LPAAVDEMST
RLDRDLGRWS RGEAAAPVGL VDGLRDVLHL CERRVYDAMV DKTYLALGTS DTLSIIIWGL
TGVIFLIVLA AYGVFELSIR RPVLRVAEAL RAEGRGAVGE TDVPMPRTIE TWLLVDAFNG
MRLQVHSRQL RLQSVLESTS DGIITVDDKG SIESINGAAE RVLGLTRDEA VGRPLGDLIP
LDRLAEDGGE EGALSRRLLA LRGREIDLPA RRADGAAFHL SLKLSDFMLG ERRYFNALIA
DVTDRKAMID RLTFLAQRDP LTGLINRRSF FDDLEKAVAR AGRFPAAGVA VISIDLDRFK
YVNDSLGHQA GDCLLKEVAE VLFGRLRETD LLARLGGDEF AVLLHGVNRE GALHVAEALR
LCLADYAFSY DGKSVEIGCS LGVATWAADV DDPEDLLARA DMAMRLAKRA GRNRVHLFEE
GDLEVRARVV ADAGYSKLID RGLRNNLFRP VFQPIIDVTS GAVVGHETLA RLHDPAAIGL
TMDVLIPVAE RFGLAVEIDR QIILAVTEAL AEDAGWLEGG FLSFNLSAQS VGDGRIFSAV
RRLIATRRLP PQALIFEITE TAAIASLAAA RTFLKALTDL GCKTALDDFG SGYSSFTYLR
ELPVDFLKID GRYVRDIHHD PVKAAMVQAI NTVAHAMGMR TIAECVEEAS GLEVLRQSGV
DCAQGFLFGR PAPLGPWIVP NPIPKGIGRP RLALVAPEGR
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