Gene Rru_A2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2687 
SymbolrplD 
ID3836122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp3106607 
End bp3107227 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID637826793 
Product50S ribosomal protein L4 
Protein accessionYP_427771 
Protein GI83594019 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0662732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGCG ACGTTAAGAC ACTGGACGGC AAGGACGCGG GCTCGATCGA GCTGTCCGAT 
TCCGTCTTCG GGCTGCCGGT CCGCACCGAC CTGCTGCACC GGATGGTGCG GTGGCAATTG 
GCCCGCCGTC AGGCTGGAAC CCATAAGACC AAGGGGATCA GCGAGATCTC CGGAACCACG 
GCGAAGCCCT TCAAGCAGAA GGGTACGGGT CATGCCCGCC AGGGATCGAA GCGCAGCCCG 
CAGTTCCGCG GTGGCGCGAC GATCTTCGGA CCGGTCGTGC GTTCCCACGC CCATGATCTG 
AATAAGAAGG TCCGCAAGCT CGGTCTGAAG ACCGCGCTGT CGGCCAAGGC CCAGGCCGGC 
CAGCTCATCG TCCTTGATCA GGCGATCAGC GAGTCCGGCA AGACCAAGGA CCTGCTGGCC 
CAGCTGAAAG TTCTGGGGCT GGAGAAGGTT CTGTTCATCG ACGGTCCCGA GGTGAATGAG 
AAGTTCGCCC TGGCCGCGCG CAACATCATC GGTCTGGACG TGCTGCCCCA GCAGGGCGCC 
AACGTCTACG ATATCCTGCG CCGCGACACC CTGGTGCTTA CCAAGGAGGC CGTGAAGCAC 
CTTGAGGAGC GTCTGCAATG A
 
Protein sequence
MKCDVKTLDG KDAGSIELSD SVFGLPVRTD LLHRMVRWQL ARRQAGTHKT KGISEISGTT 
AKPFKQKGTG HARQGSKRSP QFRGGATIFG PVVRSHAHDL NKKVRKLGLK TALSAKAQAG 
QLIVLDQAIS ESGKTKDLLA QLKVLGLEKV LFIDGPEVNE KFALAARNII GLDVLPQQGA 
NVYDILRRDT LVLTKEAVKH LEERLQ