Gene Rru_A2682 details

Gene Information

• Locus tag: Rru_A2682
• Symbol: rpsC
• ID: 3836117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 3104108
• End bp: 3104779
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637826788
• Product: 30S ribosomal protein S3
• Protein accession: YP_427766
• Protein GI: 83594014
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0092] Ribosomal protein S3
• TIGRFAM ID: [TIGR01009] ribosomal protein S3, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.631752
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACAGA AAGTCAATCC GATCGGGCTG CGTCTTGGTA TCAACCGGAC GTGGGACTCC 
CGCTGGTTCG CCGGCCGCGA CTATGCGTCG CTGCTGCACC AGGATCTGGC GATCAAGAAG 
TATCTGAAGA GCAAGCTGGC CCAGGCCGGC GTCTCGCGGA TCGTCATCGA ACGTCCGGCC 
AAGAAGGCCC GCATCACCAT CCATACCGCC CGTCCGGGCG TGGTGATCGG CAAGAAGGGC 
CAGGACATCG AGAACCTGCG CAAGAAGCTG CAGGTGATGA CGGGCAACGA GGTTCACCTC 
AACATCGTCG AAATCCGTAA GCCGGAGCTC GACGCCCAGT TGGTGGCCGA GAATATCGCC 
CAGCAGCTCG AGCGTCGCGT CGCCTTCCGC CGCGCCATGA AGCGCGCCGT TCAGTCGGCG 
ATGCGTCTGG GGGCCCTGGG CATCCGAATC AACTGTGGTG GCCGTCTGGG TGGCGCGGAA 
ATCGCCCGCA CCGAATGGTA TCGCGAAGGT CGCGTGCCGT TGCATACCCT GCGTGCGGAC 
GTGGACTACG GCACCGCCGC GGCCCACACC ACCTATGGCG TCTGTGGCGT TAAAGTCTGG 
GTGTTCAAGG GCGAGATCAT GGAACACGAT CCCATGGCCC AAGATAAGCG CTCCCAGGAC 
CAGGGCCGCT GA 

 

Protein sequence

MGQKVNPIGL RLGINRTWDS RWFAGRDYAS LLHQDLAIKK YLKSKLAQAG VSRIVIERPA 
KKARITIHTA RPGVVIGKKG QDIENLRKKL QVMTGNEVHL NIVEIRKPEL DAQLVAENIA 
QQLERRVAFR RAMKRAVQSA MRLGALGIRI NCGGRLGGAE IARTEWYREG RVPLHTLRAD 
VDYGTAAAHT TYGVCGVKVW VFKGEIMEHD PMAQDKRSQD QGR