Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2676 |
Symbol | rplE |
ID | 3836111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3101899 |
End bp | 3102438 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637826782 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_427760 |
Protein GI | 83594008 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.365679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTT TGCAAGAGCA CTACCAGACG GTCGTCAAGA AGGCGCTGTT GGAGAAGTTC CAGTACGGCA ACGTTATGGA AATTCCGCGC CTCGAGAAGA TCGTCATCAA CATGGGTGTT GGTGAAGCCT CCCAGGATCG CAAGTTGATC GAAGGGGCCT TGACCGACAT GACGGCGATT TCCGGCCAGA AGCCGATCAT CACCCGCGCC AAGAAGTCCA TTGCGGCCTT CAAGCTTCGC GAGCAGATGA TCGTTGGCTG TAAGGTTACG CTGCGCCGTG ATCGGATGTT CGAGTTCCTC GACCGTCTGG TCACCATCGC CCTGCCGCGC GTTCGCGACT TCCGCGGAGT TTCCGCGAAG AGCTTCGACG GCCGGGGCAA CTACAATATG GGGCTGAAAG AGCAGATCGT CTTCCCTGAG ATCGACTACG ACCGTGTCGA TAAGGTCCGG GGTATGGATA TCACGATCTG CACCAGCGCG AAGTCCGACG AGGAAGCCAA GGCGCTTCTC GAAGGCTTCG CCATGCCCTT CATGAAGTAA
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Protein sequence | MARLQEHYQT VVKKALLEKF QYGNVMEIPR LEKIVINMGV GEASQDRKLI EGALTDMTAI SGQKPIITRA KKSIAAFKLR EQMIVGCKVT LRRDRMFEFL DRLVTIALPR VRDFRGVSAK SFDGRGNYNM GLKEQIVFPE IDYDRVDKVR GMDITICTSA KSDEEAKALL EGFAMPFMK
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