Gene Rru_A2671 details

Gene Information

• Locus tag: Rru_A2671
• Symbol: rpsE
• ID: 3836106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 3099629
• End bp: 3100228
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637826777
• Product: 30S ribosomal protein S5
• Protein accession: YP_427755
• Protein GI: 83594003
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.390109
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGTA CACCCAACAC GGATCGTCGC CAGCGCGGCG GCGACGACCA GCGCAACCGG 
TCTCCCCGGA GCGATGAGCG CGACGAGGAG TTCCTCGACA AGCTCGTTCA CATCAATCGC 
GTCGCCAAGG TGGTCAAGGG CGGTCGGCGT TTCGCCTTCG CCGCCCTGGT TGTCGTCGGT 
GACGGCAAGG GCCGCGTCGG CTTCGGGACC GGTAAGGCCC GCGAAGTTCC CGAGGCGATC 
CGCAAGGCGA CCGACCAGGC CAAGCGCACC ATGATTAAGG TGCCGCTGCG CGAGGGTCGG 
ACGCTTCACC ACGACACCAA CGGCCATTTC GGCGCCGGCT GGGTGACCCT GCGTTCGGCT 
CCGGCCGGTA CGGGCATCAT CTCGGGCGGT CCGATGCGCG CGGTCTTCGA GACCATGGGC 
GTCCAGGACG TGGTTGGCAA ATGCACGGGA ACCACCAACC CGTACAACAT GATCAAGGCG 
ACCTTCGATG CCCTGGTCAA CAGCCAGGCT CCCCGTCAGG TCGCGGCGCG CCGCGGCAAG 
AAGGTGGGCG ACATCGTGGC TCGCCGTGAT GGCGCGGCCG CCGCTGGCGC CACCGAGTAG 

 

Protein sequence

MARTPNTDRR QRGGDDQRNR SPRSDERDEE FLDKLVHINR VAKVVKGGRR FAFAALVVVG 
DGKGRVGFGT GKAREVPEAI RKATDQAKRT MIKVPLREGR TLHHDTNGHF GAGWVTLRSA 
PAGTGIISGG PMRAVFETMG VQDVVGKCTG TTNPYNMIKA TFDALVNSQA PRQVAARRGK 
KVGDIVARRD GAAAAGATE