| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2618 |
|---|
| Symbol | |
|---|
| ID | 3836053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3046037 |
|---|
| End bp | 3046954 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826724 |
|---|
| Product | farnesyl-diphosphate synthase |
|---|
| Protein accession | YP_427702 |
|---|
| Protein GI | 83593950 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGACC TTGGGACCGT GAGTCATCTC AACGAAGTCA TGGCCGCCGA AGCGCTGGCC
ATCAACGATC ACCTGTCGCA ACTGATGCCG GCGACGGACG GCCCCGAGGG GCGGGTCGTC
GACGCCATGC GCTACGCCGC CCTTGAGGGC GGCAAGCGTC TGCGGCCGTT TCTGGTCTTG
CAGTCGGCGC AGTTGTTTTC GGTGTCGCGG GCCTGCGCGC TGAATGTCGC CGCCGCCATC
GAAATGATCC ACTGCTACTC GCTGATCCAC GACGACCTGC CGGCGATGGA TAACGATGAT
CTGCGCCGGG GCCGCCCCAC CGTCCATCGG CAATACGACG AGCCGACCGC CATCCTGGCC
GGCGACGCCC TGTTGACCAA GGCCTTCGAG GTCATCGCCC TGCCCGGCAC CCATTCCGAT
CCGGCGGTGC GCTGCGACTT GGTCACGGAG CTGGCGATCG CCGCCGGCGC CAAGGGCATG
GTCGGCGGTC AGATGATCGA TCTGATGGCC GAACGCGGCC TGATCGACGG CGCGCTCGAC
GTTCCGGCGA TCACCCGCAT GCACCAGCTC AAGACTGGGC GGCTGATCAG CTTCTCCTCG
ATCGCCGGGG CGATCCTGGG CAAGGCGCCG CGCTCGCAGC GTCAGGCCCT GTTCAATTAC
GCCCATGATC TGGGTCTGGC CTTCCAGATC GCCGACGACC TGCTCGATGT GGAGGGCGAT
ACCGCCACCC TGGGCAAGAC CGCCGGCAAG GACGAGGCCT CGGGCAAATC CACCTTCGTT
TCCCTGCTTG GCCTCGAGCG CGCCCGCGAT CAGGCCGACA TGCTGGCCGA ACAGGCCGTC
AATCACCTTG ACGCCTTCGA CGAGAAGGCC GACCTGCTGC GCGCCGTTGC CCGTTTCGTC
GTCGACCGCA AAAGCTGA
|
|---|
| Protein sequence | MGDLGTVSHL NEVMAAEALA INDHLSQLMP ATDGPEGRVV DAMRYAALEG GKRLRPFLVL
QSAQLFSVSR ACALNVAAAI EMIHCYSLIH DDLPAMDNDD LRRGRPTVHR QYDEPTAILA
GDALLTKAFE VIALPGTHSD PAVRCDLVTE LAIAAGAKGM VGGQMIDLMA ERGLIDGALD
VPAITRMHQL KTGRLISFSS IAGAILGKAP RSQRQALFNY AHDLGLAFQI ADDLLDVEGD
TATLGKTAGK DEASGKSTFV SLLGLERARD QADMLAEQAV NHLDAFDEKA DLLRAVARFV
VDRKS
|
|---|
| |