| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2571 |
|---|
| Symbol | |
|---|
| ID | 3836006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2989976 |
|---|
| End bp | 2991319 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637826677 |
|---|
| Product | FeS assembly protein SufD |
|---|
| Protein accession | YP_427655 |
|---|
| Protein GI | 83593903 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.993498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTGC CCCAAACCCA GCCCTTCCTC GATACCCTGG CGCCCGCGTC TTACGCGGAC
GGGGGGGATG GCGACGGGAA ACCCGGCTGG CTTGACGATC TGCGTCAGGC CGGTCTGGAC
ATCTACCGGC GCCAGGGGCT GCCCACGCCG CGGGTGGAGG CCTGGAAGTA CACCAATCTG
GGTGGGCTGA CCAAGATCGC CTTCAAGCCC GAGCCGGCGC CGGTGACCCT GGATCCCGGG
CGTCTGCCGC TTGATCGCGT TCTGGCGCTT GACGCCCACA AGCTGGTCTT CGTCAACGGC
CGGCTTGATC GGACGCTCTC GGACGCGGGG GATCTTCCGG CCGGGCTGCG GGTCAGCGGC
CTTGCCGCGC TGCTGGCCGA GGATCCGGCG CGGATCGAAC CGCTGCTGGG CAAGGGCGCG
GCCCTTGACG ATCTGCCGCT GGCCGCGCTC AACACTGGCA TGATCGCCGA TGGCATGGTG
ATCGAGGTCG CCGAGGATGC GGTGATCGAG CGGCCGCTGC ATGTGATCGC CGTTTCGGCG
GCGCTTGACG GCCCAATGGT GTTCTATCCG CGCCTGCTGG TGGTGGTCGG CGCCCGCGCC
CGTCTGGTTC TGGCCGAAAG CCATGTCGGC CTGCCCGATC ATCCGGCCTT TTCCAATGGG
GTCAGCGAGA TCTCGTTGGG CGAGGGCGCC CAGTTGTCCC ATTACCGCCT GATCGACGGC
GCCGCCGATG GCTATCTGGT TGGCACCACC CTGGTCGAGG TCGGGGTGCG GGCCGGTTAT
GAAAGTTTCA CCCTGGAACT GGGCGGCCGG CTGACCCGCA ATGAAATCCG CGTCACCCTG
GCCGGCGAAG AGGGGCAGGC TCGGGTCAGC GGCGGTTATG CGGTGCGCGC CGGCCAGCAT
CTCGACAATA CGGTGCTGAT TGACCATGCC CAACCGGGCG CCACCTCGCG CCAGTTGTTC
AAGGGCGTGC TCGACGAGAC CGGCAAGGCG GTGTTCCAGG GCAAGATCCT GGTGCGGCGC
GGCGCCCAGA AGACCGATGG CCAGCAATTG CACAAGGCCT TGTTGCTGTC GCGCGGCGCC
GAGGTCGATA CCAAGCCCGA GCTTGAGATC TATGCCGACG ACGTGGTCTG TGGCCACGGC
GCCACCGCCG GCGAAATGGA CGCCGACCAG CTTTTCTATC TTCAGGCGCG AGGCCTGGAC
GAGGCGACCG CCCGCGCCCT GCTGGTGGAA GCCTTTCTGG AAGACGTCGT CGGCGAAGTC
GGCGATCTGC CGGTGCGCGC GGCGATGATC GCCAAGGTGC GCGATTGGCA GCGCGCCCGT
GACGGCGCGG TGTGGAGCGA GTAG
|
|---|
| Protein sequence | MTLPQTQPFL DTLAPASYAD GGDGDGKPGW LDDLRQAGLD IYRRQGLPTP RVEAWKYTNL
GGLTKIAFKP EPAPVTLDPG RLPLDRVLAL DAHKLVFVNG RLDRTLSDAG DLPAGLRVSG
LAALLAEDPA RIEPLLGKGA ALDDLPLAAL NTGMIADGMV IEVAEDAVIE RPLHVIAVSA
ALDGPMVFYP RLLVVVGARA RLVLAESHVG LPDHPAFSNG VSEISLGEGA QLSHYRLIDG
AADGYLVGTT LVEVGVRAGY ESFTLELGGR LTRNEIRVTL AGEEGQARVS GGYAVRAGQH
LDNTVLIDHA QPGATSRQLF KGVLDETGKA VFQGKILVRR GAQKTDGQQL HKALLLSRGA
EVDTKPELEI YADDVVCGHG ATAGEMDADQ LFYLQARGLD EATARALLVE AFLEDVVGEV
GDLPVRAAMI AKVRDWQRAR DGAVWSE
|
|---|
| |