Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2378 |
Symbol | |
ID | 3835812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2769874 |
End bp | 2770398 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637826486 |
Product | transcriptional regulator |
Protein accession | YP_427465 |
Protein GI | 83593713 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCGGC CAATCGTGAC TCCCAGCGGA GTCGAGCGCT TCTTCGGCGA AGACCAGATC ATTGTTTCGA AGACAGATCT AAAGGGCATC ATTACCTATG CCAATGATGT CTTCTTGAAG GTCGCCGGCT ACAAGGAGGC TGAAATCCTT GGAAAACCCC ATAATATCAT CCGCCATCCC GATATGCCGG CTTGCGTCTT CAAGCTTCTG TGGGACCGTA TCCCGGCAGG TCACGAAGTC TTCGCCTATG TGATCAATAT GGCCAAGAAC GGTGATCATT ACTGGGTTTA TGCCCATATC ACCCCGACGT TTTCGGCCTC CGGGCAGGTC ATCGGCTATC ATTCCAGCCG CCGCGTTCCC GAAGCCCGGA TTCTTCCCGG CATCAAGGAT CTTTATGCGG CGTTGCTGGA CGAAGAGCGC CGCCATGCCT CGCCAAAAGA CGGTATGGCC GCCGCCATGG TCCTCGTCGA GGATCTTTTG GCAAAAACCG GCCAGACCTA CGACGAATTC ATTCATGGCC TGTGA
|
Protein sequence | MSRPIVTPSG VERFFGEDQI IVSKTDLKGI ITYANDVFLK VAGYKEAEIL GKPHNIIRHP DMPACVFKLL WDRIPAGHEV FAYVINMAKN GDHYWVYAHI TPTFSASGQV IGYHSSRRVP EARILPGIKD LYAALLDEER RHASPKDGMA AAMVLVEDLL AKTGQTYDEF IHGL
|
| |