Gene Rru_A2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2357 
Symbol 
ID3835791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2744061 
End bp2745071 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content64% 
IMG OID637826465 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_427444 
Protein GI83593692 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0452163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCGT TCATTCTCAG ACGGGTCGTG CTGATCATCC CGGCCTTCAT CGGGGTGACC 
TTGCTGGCCT TCGCCTTGAT CCACCTGATC CCCGGCGACC CCATTTTGGT CATGGCCGGC 
GAACGCGGGG TAAGCCCCGC GCGCCATGCC ATGCTGATGA CCCAACTCGG CCTCGACCGG 
CCGTTGTGGG AGCAGTATCT GACCTATCTG GGGAAGGCGC TGCAGGGCGA CCTTGGTAAC 
TCCATCGTCA CCCGCCAGCC GGTCATCGAA GAATTCAAGA CGCTGTTCCC GGCGACCATC 
GAGCTTGGCG TCTTCGCCAT GGTCTTCGCC GTGCTGATCG GCATCCCGGC GGGCATGTTG 
GCGGCGGTCA AACGCGGCAC CAGCCTCGAT CACGGGGTGA TGGTCGTCAG CCTGACGGGC 
TATTCCATGC CGATTTTCTG GTGGGGCCTG CTGCTGATTA TGCTGGTTTC GGGCATCCTC 
GGCTGGACGC CGGTCTCCGG GCGCATCGAT TCCATCATGT GGATCGACAC CGTCACCGGC 
TTCATGCTGA TCGACAGCCT GCTGTCGGAC GAACCCGGCG CCTTCCTGTC GGCTGTTCAC 
CATCTGATCT TGCCCGCCAT CGTCGTCGGC ACCATCCCCT TGGCGGTGAT CGCCCGCATG 
ACGCGGTCGG CCATGCTCGA GGTCCTGCGC GAGGATTATG TCCGCACCGC GCGGGCCAAG 
GGGGTCAGCC CCGGCCGGGT GGTGATGGTC CACGCCCTGC GCAACGCCCT GATCCCGGTG 
ATCACCGTCA TCGGCCTGCA GACGGGCGTT CTGCTGGCCG GCGCCATCCT GACCGAGACG 
ATCTTCGCTT GGCCCGGGGT TGGCAAATGG CTGGTCGACA GCATCAACCG CCGTGATTAT 
CCGGCGGTTC AGGGCGGCAT CTTGCTGATC TCCACCGTGG TCATTCTGGT CAACCTGCTG 
GTCGATGTGC TGTATGGCGT CATCAACCCG CGCATCCGCC ATCGACGGTA A
 
Protein sequence
MISFILRRVV LIIPAFIGVT LLAFALIHLI PGDPILVMAG ERGVSPARHA MLMTQLGLDR 
PLWEQYLTYL GKALQGDLGN SIVTRQPVIE EFKTLFPATI ELGVFAMVFA VLIGIPAGML 
AAVKRGTSLD HGVMVVSLTG YSMPIFWWGL LLIMLVSGIL GWTPVSGRID SIMWIDTVTG 
FMLIDSLLSD EPGAFLSAVH HLILPAIVVG TIPLAVIARM TRSAMLEVLR EDYVRTARAK 
GVSPGRVVMV HALRNALIPV ITVIGLQTGV LLAGAILTET IFAWPGVGKW LVDSINRRDY 
PAVQGGILLI STVVILVNLL VDVLYGVINP RIRHRR