| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2348 |
|---|
| Symbol | |
|---|
| ID | 3835776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2722265 |
|---|
| End bp | 2727778 |
|---|
| Gene Length | 5514 bp |
|---|
| Protein Length | 1837 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637826450 |
|---|
| Product | glycosyl transferase |
|---|
| Protein accession | YP_427435 |
|---|
| Protein GI | 83593683 |
|---|
| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases
[COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATA CGCCCGCATT CACCCTTGTC GCCCACCTTG AAGCCGGTGA CTGGGACGCC
CTTCGGCGGG CGCTTTCCCA AAAGGAAACC CCCGCGAGCC TTCTCACCCA AACCTTGGCC
GAGGGCCGCT GCCCCGAAAC CCCTCCCCCG CCGGGCGGAG CGTTTTTGCC AAGCTATTCC
CTGAAAAGAA GCCTGGGCGA CCCGAGTGCC GTCGTTGCCC GCCTGTGTCA GATCGCCCGC
GAGACCCGGG CCGCCGGCAA TGACCCGCTG GCGGCGGACC TCTACCGCAC GGCCCTGGCC
TTCGACCCCA GATGCGCCGA GGCGTCGCTG GCGTTGGCCT GGGACAGCTA CGCCCGGGGC
GACCGCTGCG GCGCCGTGGA CCGGGCCGAA CGGGCGGTCC AGGCGACCCC CAACGATGCC
GAGGCCGCGA CCACGCTCGG CTGGCTGTAC TGGGAAGCCG GCCGGGGAGA GGCGGCGACG
CGGACGCTGT GTGCGGCGGT TGACCGCCAC CCGCGACAGG CGACGGCTTA TTGGTATTTG
GGGCATATCT GCGCCCGCCA GGGGCGACTG GCCGAGGCCG AGCGCCTGTT GCGCCACGCC
CTGGCCCTGG CGGCCGACAC CGACGCGCCC AACGGCGAGA TCGCCGCCAG CCTGTCTTGG
GTGCTGGCTG ATCTCGGGCG CCTTGACGAG GCCCTGACCC TCGCCCACGA CACCGCCCGA
CGCGATCCCG CGCCGCGCCA CCTCGCCCAC CTTGGGCGGC TGCTGACGCA AAAAGGGGAA
TACGAGGCGG CCCTGGTCCT GCTTGACCGG GCCACGGCGG AGAGGCCCGG TGATTGGGCC
GCGACGGCCG ACCTCGCCAC CGCGCTTAGC CGCACCGGCC GTGGCAGGGA GGCCTTGACC
CTGATCGAAA CCGCCCTTGC CGCCGCTCCC GACGAGCGCC GGCTGGCCCT GCGACAGGCG
ACGCTGTTGC GCGACGGCGG CGCCCATCCC CAGGCCGCCC TGATCGCCGC GCAGATCGTC
GAGCGCTGGC CGGACTGGGG CGAAGGGTGG TTTCTGCGCG GCCAGATCAA GCGCGACGAC
GGCCAGGATG AAGAGGCGCT GGACTGCTTC GCCCGGGCGC AGGCATGCGA TCCCTCGTTG
ATCGCCGCCA TCTTGGAACG CTCGCGTCTG TTGCTGCGGC TGGGTCGGGC CGAGGCGGCG
GCCGGGCTGA TGGAGGATCT GTTGCGCGAG GCGCCCGGCC ATCCCGCCGC CCGCAAGCAC
TTGGCCTGGG CCCTGATCGG CCAGCGCAAG GGCGCGATCG CCCGTCCGCA GATCCACATC
TTGTTGCAAA GCGCGCCGCG GGCCGCCGAG TTGTGGACGG CCCTGTCAAC GGCGCTCCAC
CAGATGGGCC GGCTGACCAC CGCCCGCCTT GCCGCCCGCC GGGCCAGACG CCTCGCGCCA
ACCGACTGCG ACGCCCTGCG CCATGGCGCC GCTTTGGAAC TGGAGGCGGG CGATCTTTCG
GCGACGTCGG AACTGTGCCA CCGGTTGCTG CATCTGGCCC CGACCTTGCC CGCCGCCCAC
ATCATGGCCG GTTTCGCCCA TCAAGCCTCG GGCCGGCTGG TCGCGGCCGA GCGCCATGCC
GAACAGGCGA TCGCCCTGGC CCCCAAGGAC GCGGAGGCCT GGAGGTGCCT TGGCCATCTG
CGCCATCACC AGAACCGGCT GGCCGAGGCC GAGGAGGCTT TGCACAACGC CCACGCGCTG
GCGCCCGGAC GCGGGGACGT GCTGGGGCAA CTCGCCTGGG TTCTGGTGAT GGACGACCGC
CTGCCCGAAG CCTTGATCGT CATGCGCAAG GCCTGCGACC TGACGCCCGA GAGCGCCGAG
CGGGCGCTGG AACAGGCCGA GATGCTGGCC CTGGCCGGCC GCCCCGCCGA GGCGATCATC
GCCGCCACCC GGGCCCGGGA TCTCGGTCCC TCGCCGCTGG CCGCCCAAGC CTTGCTGGCC
AGGATCCACC TCAGTCGGGG GCATATCGAG GCGGGCGACG GCGATACGGC TTGGGCAGAG
GCCGCCCGGT GCGCCGCCAC CTTGCTTTAC CGCGACCCCA GCCACCTCGC CGCCGCCCAT
GTCGCCGTAC GGCTGGCCGC CGCCGGCCAA CCGCGCGCCG CCGATCTGGT GGCGCTGCTG
CCAAGCGCCC TGCATCGCCG CGTCCTGCGC GAAGGCCTGG AATGGGTGAC CGGCTTTGGC
AATGCCCGGG AGGCGACGCG CCTGACCCGG GCGACCCGGG CGGCCTTTCC CGAAGATCGC
GACCTGACCA TCGCCTGCCT TTATCTGGAA ACCATGGCCG GACAGGCGCC CGCCGCCGAC
ACCGCCCGCC AATTGCGGCA GTGGGGCCTG GAGCACGCCC AGTCCTGGGG CCCCCTGCCG
CCCCGCCCCC GGCTGGCCGC CACGCCCGGT CGCCCCCTCC ACGTCGCCTA TCTCGCCTCG
CGCTATCACC ATGCCCTGCT GAGCGGCATT CTCGCGACGC ATGATCGCGC CGTTGTCGTG
CCCCATCTCT ATACCGATGA CGCCGAGGCT CTACCGCCCG ATCTGCGCTC GCGGGTCATC
GTCCACCCGC TGGGCGGTGT CGATCTGGCG GCGTCCTGTG CCGCCAATGG CATCGATGTC
GTCGTCGATA CCGTCGGCCT GCACCCCTTT CACGGGCAGG CCGAGGTCCT GCGCTTCCTG
CGCCGCCGCC TCGCGCCATC GCAATGGGGC TGGTTTGGCG GTTGGGGGCC GGGAAGCGGC
CTTTTCGATG GTCTGATCAC CGATACCGTC GCCCTGCCCG CCGCCGCCGA CCATCACGAC
GAGGATATCC TGGCCCTCGC CGGGGGCCAG TGGAGCTGGA CGCCGCCCGC CGTCGCCCCG
GCCATCGGCC CTTTGCCCTC GGCGCAAACC GGCATCATCA CCTTCGGCTG CGCGGTGCGC
GGCTTCCGCA TCAGCCGAAG CTGCCTGGAA ACCTGGGCCG ATCTGCTGGC CGGCATGGAC
AACGCGCGCC TGATGATTCT GGGGCGTCAG GCCCATGACT GGGAATTCCG CGCCGGCTTC
TCCCGTCTTC TCCAGGCGTG CGGCATCGCG CCCGAGCGCG TGGTCTATCG CTTTCAGCAA
GCTTACGCCG ACCATCTGCA CAGCTTCGCC GGCATCGACA TCGCCCTTGA CACCTTCCCG
GCCAATGGCG GCCTGTGCCT TGCCGACGCC TTGTGGATGG GCGTGCCGGT GGTCACCTTG
GCCGGAACGG GTCTGCTGGC CGAACGCCAG GGGGCCTCGC TTCTCGCCGC GGCGGATTGT
GGCGACTGGA TCGCCCGCAG CCCCGCCGAC TATCTGGCGA TCGCCCGCAA GCTGGCCGGC
GATCGACAGG ACCTGGCCCT GATCCGGCAC ACCCTGCGCG ACCGGCTCGG CGCCTCGCCC
TTGCTCGATG CGCGCCGCAT CACCAGCCAG TTGGAAGCGG CTTGGTTGAA GGCGCGCGAC
GCCATGGCCG GGATCACCGC CGCTCCCGAT CTCAAAAGCC GCTCTCAGGC GCTTGCCAAG
CGGGATCTGG CGGTCTGGCT TGGGCGCGAG CGCTCGCTGA CTCTGCCACC TTCGCAAGGC
GCCGATGACG CGCCCGATCT CTCGGTGGTC ATCGTCCTTT ACAATCAGGC GGGGCTTAGT
CTGCGAACCC TGATCGCCCT GGCCGATCAG CAGGGGGTTC GCTTCGAGAC CATCATCGTC
GACAACGCGT CGACGGATGA AACGCCGGCC CTGCTGGCCC GGGTGCGCGG CGCCACCCTT
TTGCGCAACG AAGACAACAT CGGCTTTCTG CGCGCGGCCA ATCAGGGGGC GGCCGTGGCG
CGCGGCAAGC ACATCGTCTT CTTGAACAAT GACGTCTTCC TCCATCGCGA CGCCCTCGCC
GCCGCCCTGC GCCGCCTGCG CGCGGACCCC TCCATCGGCG TAGTCGGTGG CCGGGTGGTG
CTGATCGACG GCAGCCTTCA AGAGGCGGGC TGCATGGTTT TCAACGATGG CTCGACCGCC
GGCTATGGGC GTGGCGAGGA TCCCAACCTT GCGGAATTCC GCTTCCTGCG CGAGGTCGAT
TACGTCTCGG GGGCCTTCCT GATGCTGCCC CGGGCCCTGT GGCGGGCGCT TGGCGGCTTC
GAGCCAGCCT TGGCGCCAGC CTATTACGAG GATACCGACC TGTGCCTCAG GGTTCATCGC
GCCGGCTTCC GGGTGGTCTA TGATCCCGCC GTCGTCCTCA CCCATGTGGA GGGGGGCAGC
ACCGTCACCT CGGACGCCGC CGCCGCCATG ATCCGCCGCA ACCGCGGCGC CTTCCTGGCC
CGCCACGCCG AGGCCTTGCG CTCCCGCCCG TCACCGGCGG CCGCGCGGCC CTTGCGCGAT
CGCTGGGCGC CCGCGCCGGC GCCCCGGGTT CTGGTCATCG ACAACGGCGT GCCCCATAGC
GCCGGGGGCG CGGGCAATCC CCGGGCCCGC CTGATGATCG AGGCCCTGGC GGGCTGTCAT
GTCACCTTCT TTCCCATGTG GGTCCGCGAA AGCGACTGGG CGGCCGTTTA TCGGACCCTT
GGCGCCGAGG TCGAGGTTAT GCTCGATCAG CATGCGACCA CGCTGGAAGA CTTCCTCGAC
CACCGCCAGG GACTCTATGA TGTGCTGGTG GTCAGCCGCC CGCCCAACAT GGCGATCGTC
AAGGCCATCG GCCGCCGCCG CCCCGACCTG TTGAAGGGGA TGAGGCTGGT TTATGACGCC
GAGGCGCTGT TCGCCCTGCG TGACATCGCC CAGGCGGCGA TCACCGCCCG CCCGCTCCCC
CGCACCGAGG CCCGCCGGCG CCTGCGCGAC GAACTCGACC TTGCCGCCGG CGCCGATACG
GTTCTCGCCG TTTCCCGACG CGAAGCCCGG CTGTTTTCCG CCGGAGGAGC GGCCAAGGTT
CATCTCGTCA GCCACGCCCT GCCCGCCCAT CCCGCCCCGC CGGGACGGGA CGGACGCTCG
GGATTCCTGT TCCTGGGCGC CCTGACGCCG GGGAGTCCCA ACGAGGATAG CCTTGTTTGG
CTGGTCGAGA GCGTTCTGCC GGCTCTGGCC CGACGCCTAC CCCGACCGCC GCCGCATCTT
AGCATCCTCG GCGAATGCCG CTCCTCGCGC ATCGCCGCCC TGGCCGGCGA ACAGGTTCGC
TTGGTCGGAC GGGTGGAAGA CCCGGCGCCC TGGTATGATC AGGCGGCGGT CTTCGTCGCC
CCGACCCGCT TTGCCGCCGG CATCCCCCTC AAAGTGATCG AGGCCGCCGC CGCCGGGCTG
CCGGTGGTGG CGACGCCCTT GCTGGCGCGG CAATTGGGCT GGAGCACCGG GGATTACCTC
TTGGCCGCCG GCGATGCCGA GGGCTTCGCC GCCGCCATGG CGGCCCTTTA CACGGACGGC
GCGCTGTGGC GACGCATCCG CGATGGCGCC CTGGCCCGGG TGAGCACCGA GAACGCCCCC
GACCGTTTCC GCGACACGCT GCGCGAGGCC GTTCTGGGGA GGGGGATCGG ATGA
|
|---|
| Protein sequence | MPDTPAFTLV AHLEAGDWDA LRRALSQKET PASLLTQTLA EGRCPETPPP PGGAFLPSYS
LKRSLGDPSA VVARLCQIAR ETRAAGNDPL AADLYRTALA FDPRCAEASL ALAWDSYARG
DRCGAVDRAE RAVQATPNDA EAATTLGWLY WEAGRGEAAT RTLCAAVDRH PRQATAYWYL
GHICARQGRL AEAERLLRHA LALAADTDAP NGEIAASLSW VLADLGRLDE ALTLAHDTAR
RDPAPRHLAH LGRLLTQKGE YEAALVLLDR ATAERPGDWA ATADLATALS RTGRGREALT
LIETALAAAP DERRLALRQA TLLRDGGAHP QAALIAAQIV ERWPDWGEGW FLRGQIKRDD
GQDEEALDCF ARAQACDPSL IAAILERSRL LLRLGRAEAA AGLMEDLLRE APGHPAARKH
LAWALIGQRK GAIARPQIHI LLQSAPRAAE LWTALSTALH QMGRLTTARL AARRARRLAP
TDCDALRHGA ALELEAGDLS ATSELCHRLL HLAPTLPAAH IMAGFAHQAS GRLVAAERHA
EQAIALAPKD AEAWRCLGHL RHHQNRLAEA EEALHNAHAL APGRGDVLGQ LAWVLVMDDR
LPEALIVMRK ACDLTPESAE RALEQAEMLA LAGRPAEAII AATRARDLGP SPLAAQALLA
RIHLSRGHIE AGDGDTAWAE AARCAATLLY RDPSHLAAAH VAVRLAAAGQ PRAADLVALL
PSALHRRVLR EGLEWVTGFG NAREATRLTR ATRAAFPEDR DLTIACLYLE TMAGQAPAAD
TARQLRQWGL EHAQSWGPLP PRPRLAATPG RPLHVAYLAS RYHHALLSGI LATHDRAVVV
PHLYTDDAEA LPPDLRSRVI VHPLGGVDLA ASCAANGIDV VVDTVGLHPF HGQAEVLRFL
RRRLAPSQWG WFGGWGPGSG LFDGLITDTV ALPAAADHHD EDILALAGGQ WSWTPPAVAP
AIGPLPSAQT GIITFGCAVR GFRISRSCLE TWADLLAGMD NARLMILGRQ AHDWEFRAGF
SRLLQACGIA PERVVYRFQQ AYADHLHSFA GIDIALDTFP ANGGLCLADA LWMGVPVVTL
AGTGLLAERQ GASLLAAADC GDWIARSPAD YLAIARKLAG DRQDLALIRH TLRDRLGASP
LLDARRITSQ LEAAWLKARD AMAGITAAPD LKSRSQALAK RDLAVWLGRE RSLTLPPSQG
ADDAPDLSVV IVLYNQAGLS LRTLIALADQ QGVRFETIIV DNASTDETPA LLARVRGATL
LRNEDNIGFL RAANQGAAVA RGKHIVFLNN DVFLHRDALA AALRRLRADP SIGVVGGRVV
LIDGSLQEAG CMVFNDGSTA GYGRGEDPNL AEFRFLREVD YVSGAFLMLP RALWRALGGF
EPALAPAYYE DTDLCLRVHR AGFRVVYDPA VVLTHVEGGS TVTSDAAAAM IRRNRGAFLA
RHAEALRSRP SPAAARPLRD RWAPAPAPRV LVIDNGVPHS AGGAGNPRAR LMIEALAGCH
VTFFPMWVRE SDWAAVYRTL GAEVEVMLDQ HATTLEDFLD HRQGLYDVLV VSRPPNMAIV
KAIGRRRPDL LKGMRLVYDA EALFALRDIA QAAITARPLP RTEARRRLRD ELDLAAGADT
VLAVSRREAR LFSAGGAAKV HLVSHALPAH PAPPGRDGRS GFLFLGALTP GSPNEDSLVW
LVESVLPALA RRLPRPPPHL SILGECRSSR IAALAGEQVR LVGRVEDPAP WYDQAAVFVA
PTRFAAGIPL KVIEAAAAGL PVVATPLLAR QLGWSTGDYL LAAGDAEGFA AAMAALYTDG
ALWRRIRDGA LARVSTENAP DRFRDTLREA VLGRGIG
|
|---|
| |