| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2275 |
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| Symbol | nikC |
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| ID | 3835703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2633732 |
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| End bp | 2634631 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637826377 |
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| Product | nickel transporter permease NikC |
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| Protein accession | YP_427362 |
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| Protein GI | 83593610 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02790] nickel ABC transporter, permease subunit NikC |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0126063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGC CTGATTGCCA GCAGGGGCAT CGCCCGCCAG ACGCCGCCCC GCTCCGGGGG
TGGCTCGCCC GCCTGCCCAT CGGCCGAAGC TGGAGCCTGC GCTTGGCCCT TCTGGTGCTG
GTCGCCCTGA TCGCCAGCGC CATCGTCGGC CAATCTCTGC TTCCCGGCGA TGCCAATGCC
ATCGACCTCG CGGCGCGCTT GCGGCCGCCG TCTTGGGAGC ATTGGCTGGG CACCGATCAC
CTGGGCCGCG ACATCTTTTT GCGGCTGCTC GCCGGGGCCG GCGTCTCGCT GGGCTCGGTC
GCCCTGTGCC TCGCCCTGGT GCTGGCGATG GGGATCGCCG TGGGCGGCGC CGCCGGGGTC
CTGGGCGGGC GCGCCGATCA GGCGATCATG CGCGTCACCG ATGTCTTCCT GACCTTTCCC
ACCCTGGTGC TGTCGTTGTT CATGGTTGGC GTGCTGGGCA GCGGGCTGAC CAATGTCATC
ATCGCCATCG CCTTGTCCCA TTGGGCTTGG TACGCCCGCA TCGTGCGCGG CATCGTTTTG
TCGCTGCGCG AGCGCGATTT CATCCTGGCG GCGCGGCTGT CGGGGGCGGG GCGGGTCTCG
ATCTTCGTCG AGCATCTGCT GCCCGCCACC GCCTCGCAGC TTCTGGTGCT GGCCAGTCTC
GATATCGGCC ACATGATGCT CCATGTCGCC GGCCTGTCGT TCCTGGGATT GGGGGTCGCC
CCGCCGATGG CCGAATGGGG GGTGATGATC AACGACGCCC GCCAGTTCGT CTGGACCCAG
CCGATGCTGA TGGTCTGGCC CGGAGTGGCG CTTTTCGTCA GCGTCATGAC CTTCAACCTG
CTTGGGGACG CCCTGCGCGA TCGTCTTGAT CCGCACCTCT GCGCGGAGCA TGGACATTGA
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| Protein sequence | MTMPDCQQGH RPPDAAPLRG WLARLPIGRS WSLRLALLVL VALIASAIVG QSLLPGDANA
IDLAARLRPP SWEHWLGTDH LGRDIFLRLL AGAGVSLGSV ALCLALVLAM GIAVGGAAGV
LGGRADQAIM RVTDVFLTFP TLVLSLFMVG VLGSGLTNVI IAIALSHWAW YARIVRGIVL
SLRERDFILA ARLSGAGRVS IFVEHLLPAT ASQLLVLASL DIGHMMLHVA GLSFLGLGVA
PPMAEWGVMI NDARQFVWTQ PMLMVWPGVA LFVSVMTFNL LGDALRDRLD PHLCAEHGH
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