| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2214 |
|---|
| Symbol | |
|---|
| ID | 3835642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2573342 |
|---|
| End bp | 2574268 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637826316 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_427301 |
|---|
| Protein GI | 83593549 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC GTCTGCCGCC GCTTAACGCC CTGCGCGCCT TCGAGGCCGC CGCCCGCCAT
GGCGGGTTCA CCCGGGCGGC CGAGGAACTG GGGGTGACTC CGGCCGCCGT CAGTCATCAG
GTCAAGGGCC TGGAAGACGT GCTGGGCCTG TGCCTGTTCC GCCGCCTGCC GCGCGGTCTG
GAATTGACCG AGGAGGGGCA GGCCTATCTG CCAGACCTCA GCCGGGGCTT TGATCGCCTG
GCCCGCGCCG GCGAACGCCT GCGCGAGGGC GGACTGGCCG GCCGGTTGAC GGTGTCGGTG
CTGCCGAGCT TTTGCGCCAA TTGGCTGGCG CCGCGCCTGC CCGACTTCCA GGCGGCCTGC
CCGGAGGTTC ATCTGCGCAT GCTGTCGGAA AACCGCTTCG CCGACTTCAA CCGCGATGGC
ATCGACATGG CCATCCGCTA TGGCCGGGGC ATCTATCCCG GCCTGCGCGC CATTCCGTTT
CTGGCCGAGG AGGTCTTCCC GGTCTGCGCG CCCTCGTTGC TCAATGGGGC CTTGCCGCTG
CGCGGCTTGG CCGATCTGCG CCACCACACG CTTCTGCGCA GCATCGACGA GACCGCCGGC
GAGCCCTGGC TTTATTGGCG GCTGTGGTTG GCCGCCGAAG GCATTGAAGG GGTAGCCCCC
GATGGCGGGA TCGGCTTCAC CGATGGCTCG GCCCTGGTCC AGGCCTGTCT GGCCGGCGTC
GGTGTCGCCC TGGGACGCAC CGCCCTGGTC GAGGACCACC TGCGCACCGG GCGTTTGGTC
CGGCCCTTCG CCGGTCTCAG CCGCCCGGCC GATTTCTCCT ATTTCGCCGT CGCCCCGGCG
GCCAATTTGG AAAACCCCCG GGTCGCCTGC TTCATCGACT GGCTGCGCGC CGCCGGCGTG
CCCGCTTGCC TAGCCGACGG GGGGTGA
|
|---|
| Protein sequence | MSRRLPPLNA LRAFEAAARH GGFTRAAEEL GVTPAAVSHQ VKGLEDVLGL CLFRRLPRGL
ELTEEGQAYL PDLSRGFDRL ARAGERLREG GLAGRLTVSV LPSFCANWLA PRLPDFQAAC
PEVHLRMLSE NRFADFNRDG IDMAIRYGRG IYPGLRAIPF LAEEVFPVCA PSLLNGALPL
RGLADLRHHT LLRSIDETAG EPWLYWRLWL AAEGIEGVAP DGGIGFTDGS ALVQACLAGV
GVALGRTALV EDHLRTGRLV RPFAGLSRPA DFSYFAVAPA ANLENPRVAC FIDWLRAAGV
PACLADGG
|
|---|
| |