| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2192 |
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| Symbol | |
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| ID | 3835619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2546081 |
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| End bp | 2547874 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637826294 |
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| Product | peptidase M3B, oligoendopeptidase-related clade 3 |
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| Protein accession | YP_427279 |
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| Protein GI | 83593527 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.246068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCATG TTGCCGCCCA GGCGAACGCT GTTTCCCCTC TTCCCGTCTG GGACCTCGGC
GATCTCTATG ATGGTCCCGA CTCCGCGGCC CTGAAGACCG ATCTTGCCGA AACCGAAAGC
GGGGCCAAGG CCTTCCGCGA CACTTACGCC GGCAAGGTCG CCGGGCTTGA TGGCGCCGCC
CTGGGCGAAG CCATCGTCGC CTTCGAGCGC CTATCCGAGA CGCTTTATCG CATTCTCAGC
TATTCGCAGC TGCTGCAGGC CGGCGATGTG ACCGATGTCG CCATCGGTCA GTTCCATCAG
GCGATGATGG AAAAAGGCAC GGCCATCTCG AGTCAGATGT TGTTCTTCAC CCTGGAAATA
AACCTTATCG ACGACGACGC CCTGGCCGAA AAGCTGAAAA ATCCGCTGGC CGGGCGTTAT
GCGCCGTGGA TTCGCGATTT GCGGGCCTTC CGCAAGCATC AGCTCTCCGA TGACATGGAA
CGCCTGCTCA ACGAAAAGGA TGTGGCGGGC AGCTCGGCCT GGATGCGGCT GTTCGACGAA
ACCGTCGCCC ATCTGCGCTT CCCCATCGAC AACGAGACCC TGACCTCGAC CGAAGCCTTC
GATCGCCTGT CCGATCCCCA GCCCGAGCGC CGCAAGGCCG CCGCCAAGGC CATCGGCGGC
GTTCTGGAAG ACAATCTGCG GCTGTTTTCG CGTATCACCA ATACCCTGGC CAAAGACAAG
CAGATCGATG ATTCCTGGCG CGGCTACGCC CATCCGATGG CGGCGCGCAA CCTGGGCAAT
CAGGTGGAAG ACGCCGTGGT CGACGCCCTG GTCTCGGCGG TGCGCGGCAG CTATGGCGAC
CTCTCGCACC GCTATTACCA GATGAAGGCC AAATGGTTCG GCCGCGACAC CTTGGATTAT
TGGGACCGCA ACGCCCCCCT GCCCGAAGCC GATGACAGCC GCTTCACCTG GGATCAGGCC
CGCGACACCG TTCTGGGAGC TTACGGCGCC TTCTCGCCCG AATTGGCGGC GGTGGGCAAG
CGCTTCTTCG ACAATCCGTG GATCGACGTG CCCGCCCGCC CGGGCAAGGC CTCGGGCGCC
TTCGCCCATC CCACCGTGCC CTCGGCCCAT CCTTACCTGC TGCTCAACTT CATGGGCCGC
ACCCGCGACG TCATGACCCT GGCCCATGAA CTGGGCCATG GCGTTCATCA GGTGCTGGCC
GCCCGCCAGG GGCCGCTGTT GTCGGATACG CCGCTGACCC TGGCCGAGAC GGCCTCGGTC
TTTGGCGAGA TGCTGACCTT CCGCGCCATG CTCGATTCCG CCGGCGACGC CAAGCGTCGG
CGCATCATGC TGGCGAGCAA GGTCGAGGAC ATGATCAACA CGGTGGTCCG CCAGATCGCC
TTCCACACCT TCGAGCACAA AGTGCATAGC GAGCGCCTGC AAGGCGAGCT GTCCCCCGAT
CGCCTGTGCG AGATCTGGAT GGAGGTGCAG ACCGAAAGTC TCGGTCCGGC CTTCCGTTTC
GATGCCGAGT ACCGCACCTA TTGGACCTAT ATCCCCCATT TCATCCACTC GCCGTTCTAT
GTCTACGCCT ATGCCTTCGG CGACTGTCTG GTGAACTCGC TTTATGCGGT CTATCAGGAG
GGGAGCGTTC CCGACTTCCA GGCGAAATAC CTGGATATGC TGGGCGCGGG GGGAACGCTG
CGCCACAAGG AGCTTCTCGC CCCCTTCGGG CTCGACGCCT CCAACCCGGA TTTCTGGAAG
CGCGGGCTTG GGGTGTTGAA GGGCTTCATT GACGAACTGG AAGAGGTGGC GTGA
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| Protein sequence | MTHVAAQANA VSPLPVWDLG DLYDGPDSAA LKTDLAETES GAKAFRDTYA GKVAGLDGAA
LGEAIVAFER LSETLYRILS YSQLLQAGDV TDVAIGQFHQ AMMEKGTAIS SQMLFFTLEI
NLIDDDALAE KLKNPLAGRY APWIRDLRAF RKHQLSDDME RLLNEKDVAG SSAWMRLFDE
TVAHLRFPID NETLTSTEAF DRLSDPQPER RKAAAKAIGG VLEDNLRLFS RITNTLAKDK
QIDDSWRGYA HPMAARNLGN QVEDAVVDAL VSAVRGSYGD LSHRYYQMKA KWFGRDTLDY
WDRNAPLPEA DDSRFTWDQA RDTVLGAYGA FSPELAAVGK RFFDNPWIDV PARPGKASGA
FAHPTVPSAH PYLLLNFMGR TRDVMTLAHE LGHGVHQVLA ARQGPLLSDT PLTLAETASV
FGEMLTFRAM LDSAGDAKRR RIMLASKVED MINTVVRQIA FHTFEHKVHS ERLQGELSPD
RLCEIWMEVQ TESLGPAFRF DAEYRTYWTY IPHFIHSPFY VYAYAFGDCL VNSLYAVYQE
GSVPDFQAKY LDMLGAGGTL RHKELLAPFG LDASNPDFWK RGLGVLKGFI DELEEVA
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