Gene Rru_A2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2175 
Symbol 
ID3835602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2525937 
End bp2526971 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID637826277 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_427262 
Protein GI83593510 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00209002 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCTG ACCCCAGCCT TTTGCTTGAT GTCCGCGATC TGCGGGTGTC GTTTCGCAGC 
GAACGCGGTC TGGTGCGCGC CGTCGATGGC GTGTCGTTCT CGGTCGGCCG CCAGGAGATC 
GTCGGGCTGG TCGGGGAATC GGGATCGGGC AAGACCCAGA CCCTGCTCAG CCTGATGGGG 
CTGATCGACG ATCCCAACGC CATCGTCGAG GGCGAGGTGC GGTTTCTCGG CGAGGATCTT 
CTGCGCCTGC CGCGCAAGGC CCTTCAGGCG CTGCGTGGCG GCAAGATCGC CATGATCTTC 
CAAGATCCGA TGACCTCGCT GACCCCGGTG CACCGGGTGG GCGATCAGAT CGTCGAGCAG 
ATCCTGGCCC ATAAGGGCGG CTCGCGCCGC GCCGCCCGCG ACAAGGCGCT GGCCCTGCTC 
GAAGCGGTGC GCATCGCCAA TCCGACGGCG GTGGTGGCGC GCTATCCCCA TGAACTGTCG 
GGGGGCATGC GCCAGCGCGT GCTGATCGCC ATGGCGCTAT CGTGCGATCC GGCCCTGTTG 
CTGGCCGACG AACCGACAAC GGCGCTTGAT GTCACCGTTC AGGCGCAGAT CCTGGATCTG 
ATCGGCCGAC TGCGCGGTGA TTTCGCCTCG TCGGTGATCC TGGTCACCCA TGATCTGGGC 
GTGGTCGCCG AGGTCGCCGA CCGGGTTTTG GTGATGTATG GCGGCCGGGT GGTGGAAGAA 
GGTCTGATGG ACGAGGTGTT TCGCGATCCC CTGCATCCCT ATACCTGGGG CCTTTTTGAT 
TCGATTCCGC CGCTGGAAGG CCCGCGCCCG CGCCGCCTGC GCTCGATTCC GGGCAATCCG 
CCGACGCTCT CGTCCCTGCC GCCGGGCTGC GCCTTCGGCC CGCGCTGCCG CTGCCGCTTT 
GACGCCTGTT CGATCTCGCC GCCGGTCCAG CGCCTGGGAA ACCGGCGCTT CGCCTGCTAT 
CTGAGCGCCA GCCAACGCGC CACCCTGCGC AACGCCCCAA ACGCGGGCGC GGCGGCCGTG 
GAGGGCTTGT CATGA
 
Protein sequence
MPSDPSLLLD VRDLRVSFRS ERGLVRAVDG VSFSVGRQEI VGLVGESGSG KTQTLLSLMG 
LIDDPNAIVE GEVRFLGEDL LRLPRKALQA LRGGKIAMIF QDPMTSLTPV HRVGDQIVEQ 
ILAHKGGSRR AARDKALALL EAVRIANPTA VVARYPHELS GGMRQRVLIA MALSCDPALL 
LADEPTTALD VTVQAQILDL IGRLRGDFAS SVILVTHDLG VVAEVADRVL VMYGGRVVEE 
GLMDEVFRDP LHPYTWGLFD SIPPLEGPRP RRLRSIPGNP PTLSSLPPGC AFGPRCRCRF 
DACSISPPVQ RLGNRRFACY LSASQRATLR NAPNAGAAAV EGLS