| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2149 |
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| Symbol | |
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| ID | 3835576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2496163 |
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| End bp | 2498832 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637826251 |
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| Product | RNAse E |
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| Protein accession | YP_427236 |
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| Protein GI | 83593484 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGC GCATGCTTAT CGATGCGAAC CACCCCGAAG AAACGCGGGT CGTGGTTCTG
GACGGTACCC GTCTCGACGA GTTTGACGTC GAGACTTCAA CGAAGAAACA GCTTAAGGGA
AACATCTACC TCGCCAAAGT CGTCCGCGTC GAACCCTCGC TCCAGGCCGC TTTCGTCGAA
TACGGCGGCA ATCGCCATGG CTTCCTGGCC TTCAACGAGA TCCACCCGGA CTATTACCAG
ATCCCCGTCG CCGACCGCGA AAAGCTGATC GCCGAGGAGG CGCTTGAAGC CGCCGCCGAT
GACGATGACG AGGCCGACAG CGTCGAGACC CTGGGCGGCG ATGAAGCCGA AGACTCGGCC
CCCGCTCCGC GCGCCAAATC GCGGGTCAGC CGCAGCTATA AGATCCAAGA GGTGATCAAG
CGCCGGCAGA TCATGCTGGT GCAGGTCGTC AAGGAGGAGC GCGGCAACAA GGGCGCGGCT
CTGACCACCT ATCTGTCGCT GGCCGGGCGC TATTGCGTGT TCATGCCCAA TACCACGCGC
GGCGGCGGCG TTTCGCGCAA GATCACCAGC GCCACCGATC GCAAGCGCTT GAAGTCGATC
ATGGGCGAAT TGATCGGCCC CAAGGGCAGC GCCGTCATCT TGCGCACGGC GGGCAGCGAG
CGGTCGCGGG CCGAAATCCG CCGCGACCAT GACTATCTGC TGCGCACCTG GGATTCCATC
CGGCAGACGA CGCTGGCCTC GCGCGCCCCT TGCCTGATCC ACGAGGAAGG CAGCCTGATC
AAGCGCGCCA TCCGCGATAT CTATTCCCGC GACATCGAGG AAATCCTGGT CGAAGGCGAT
GCCGGTTACC GCACCGCCAA GGATTTCATG AAGATGCTGA CGCCTTCGCA CGCCAAGAAG
GTCCAGCCCT ACAAAGACGA GATCATGCCG CTTTTCCACC GCTATCAGGT GGAAAGCCAG
ATGGATGCCA TGCATTCGCC GATCGCCCAG TTGCGCTCGG GCGGCTATCT GGTCATCAAC
CAAACCGAGG CGCTGGTCGC CATCGACGTC AATTCGGGCC GCTCGACGCG CGAGCGCAAT
ATCGAAGAGA CCGCCTATAA GACCAATCTG GAAGCCGCCG ACGAAATCGC CCGCCAGCTG
CGCCTGCGCG ACCTGTCCGG GCTGATCGTC ATCGACTTCA TCGATATGGA CGATCCGCGC
TCCAACGCCA ATGTCGAGCG CCGGGTCAAG GACGCGCTGC GCAACGACCG CGCCCGCATC
CAGCTTGGCC GCATCAGCCA TTTCGGCCTG CTTGAAATGT CGCGCCAGCG GCTGCGCCCC
AGCCTGATGG AAACCAGCTT CCAGCCCTGC CCGCATTGCC ATGGCTCGGG GTCGCTGCGC
TCGGTCGAAT CCACGGCCAT CCATATCCTG CGCATCATCG AGGAAGAGGG CGTGCGCCGG
CGTTCGAGCG AGGTCACGGT CACCGTGCCG ACGGCGATCG CCCTTTACAT CCTAAACAAC
AAGCGCACCG TTCTGGCCGC CATCGAGGCG CGCTATGACT TCCAGGTGTT CTTGCTGGGC
GACGACACGC TGATCGTTCC CGATTATCGC ATGGACCGGG TGAAGGCCGA GCGCGAGGGC
TTGGATGCCC TGCCCGCCGC CGCCCCCCCG CCGACCGCGC CCGTCGCCGC CCTGCCGGCG
CCCGAGGTCC TGGAAGACGA GGACGAGGAC GAGGGCACCG TCGAGGACGA GGCCTTCGCC
GAAGAGAACG GCCAAAACGG CGCCGATGCC GATGGACAGG GCCGCAAGCG CCGCCGCCGT
CGCCGCCGTC GCCGCAAGGA TCAGGACGGC GTGGAGATCG AAGGCTCGTC CGTCGACGAC
GAAGAGGGCG CGCCCGAAGG CACGGCTGAC TCGACCGAGG ACGAGGGCGC CGATGACGAG
GGTGAGACCG GCGACGAGGC CGAGGACACG GGCGACGAGT TGGACCCGGC CGACGGGTCG
CTGAGCGATC GTGATGGCCA GTCGCGCCGC CGCCGCCGTC GCCGCGGCCG TCGCGGTCGT
CGCGACGACA CGGGCAACGG CTTGCCCGAG CCCGCCGTGC CGGCCTCGAC CGCCGATACC
CTGCCCCTTG ATGACGACTC GATCGAAAGC GCCGAGATCG ACGACGATCC GACCGCCGAG
GACGAGATCA TCTCGTCGAC CGACGCGGAC AGCGCCCCGG CCGGCGAGGA CTCTGCGGCG
GCGATCACCG ATGAGCTTGG CCGCGAGGGT CGCCGTCCGC CGCGTCGCCG TCGCCCCCGC
CGCAAGGATC GGGGCGTCGA GACCAACCGC GCCATCGCCC TTGACGCCAG CGACGCCGAA
GCCGGCCCGG CGACCGCCGA AACGGATCTC GCCGCCTTCG ACGACGCCCC GGACGCCGAG
GCGCCCTTCG CTGAGCCCTT GGGCGATGAG CGGTTGCTCG ACGAGACCCC CGCCGAGATC
GCCGAGGCCG AGGCCGAAGT CGAGACCGCC GAGACGGACA TCGACCGCGA CCCCGCCGAC
GGGGAACCGC CGACCGCACC CGTCGCGCCG CCGCCGGTCG CCGTCGTCAA GACCCCCGAC
CCCGCGGCCG CCGCCGCCCC GCCGGCCGCG GTCCCGTCTT CCGACCAACC CCGCCGCGTT
GGCTGGTGGT CGAAACTGAT GTCGTCCTGA
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| Protein sequence | MTKRMLIDAN HPEETRVVVL DGTRLDEFDV ETSTKKQLKG NIYLAKVVRV EPSLQAAFVE
YGGNRHGFLA FNEIHPDYYQ IPVADREKLI AEEALEAAAD DDDEADSVET LGGDEAEDSA
PAPRAKSRVS RSYKIQEVIK RRQIMLVQVV KEERGNKGAA LTTYLSLAGR YCVFMPNTTR
GGGVSRKITS ATDRKRLKSI MGELIGPKGS AVILRTAGSE RSRAEIRRDH DYLLRTWDSI
RQTTLASRAP CLIHEEGSLI KRAIRDIYSR DIEEILVEGD AGYRTAKDFM KMLTPSHAKK
VQPYKDEIMP LFHRYQVESQ MDAMHSPIAQ LRSGGYLVIN QTEALVAIDV NSGRSTRERN
IEETAYKTNL EAADEIARQL RLRDLSGLIV IDFIDMDDPR SNANVERRVK DALRNDRARI
QLGRISHFGL LEMSRQRLRP SLMETSFQPC PHCHGSGSLR SVESTAIHIL RIIEEEGVRR
RSSEVTVTVP TAIALYILNN KRTVLAAIEA RYDFQVFLLG DDTLIVPDYR MDRVKAEREG
LDALPAAAPP PTAPVAALPA PEVLEDEDED EGTVEDEAFA EENGQNGADA DGQGRKRRRR
RRRRRKDQDG VEIEGSSVDD EEGAPEGTAD STEDEGADDE GETGDEAEDT GDELDPADGS
LSDRDGQSRR RRRRRGRRGR RDDTGNGLPE PAVPASTADT LPLDDDSIES AEIDDDPTAE
DEIISSTDAD SAPAGEDSAA AITDELGREG RRPPRRRRPR RKDRGVETNR AIALDASDAE
AGPATAETDL AAFDDAPDAE APFAEPLGDE RLLDETPAEI AEAEAEVETA ETDIDRDPAD
GEPPTAPVAP PPVAVVKTPD PAAAAAPPAA VPSSDQPRRV GWWSKLMSS
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