| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2094 |
|---|
| Symbol | |
|---|
| ID | 3835521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2420984 |
|---|
| End bp | 2424097 |
|---|
| Gene Length | 3114 bp |
|---|
| Protein Length | 1037 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826196 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_427181 |
|---|
| Protein GI | 83593429 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCA GCAGCCTTTT TATCCGCCGC CCGGTTTTCG CCACCGTGCT CAGCTTGTTG
CTGGTGGTCA TGGGCATCGC GGCGATGACC CGGCTGGCGG TGCGCGAACT GCCCGATATC
GATTCCGCCG TGGTCAGCGT CACCACCCCC TATACCGGGG CGGCGCCCGA GATCGTCGAT
ACCGATATCA CCGAGGTCAT TGAAAACGCC GTCGCCGGCG TCTCGGGCAT TCGCACCATC
ACCTCGCAAA GCCGCCGTGG CCAGGGGCGG ACGGTGATCG AATTCGAAAG CGGCGTGTCG
ATGGACGAGG CGGTCAACGA CGTGCGCGAC GCCGTGGCCA AGGTGCGCGG CGATCTGCCC
GACGATATCG AGGAGCCGCG CATCGCCAAA AGCGACACGG ATTCCGATCC GGTGATGCGC
CTCAGCCTGA CCAGCCCGCG GATGACGCCG ATCGAGCTGA CCGATTTCGC CGATCGCTAC
ATCGTCGACC GGCTGGCGAC CATCGATGGC GTCGCCCAGG TCGATCTCTA TGGCGAGCGC
CGCCAGGCCA TCCGCCTGTG GCTGGACCGC CGGGCGATGG CCGCCCGTCA AGTGACGGTT
CAGGATGTGG AAGCGGCCCT GCGCCGGGCC AATGTCGAAC TGCCCGCCGG CGAGATCGAA
AGCGCCTCCC GCCTGCTGAC CGTGCGGGCG GCGACCCTGT TGACCAGCCC CGAGGCCTTT
GGCAGCACGG TTATCAAGGT CGTCGACGGC TATCCGCTGC GGGTGCGCGA TGTCGCCCGC
GTCGAACTGG GAGTGGAGAA CGACGACACC ACCGTGCGCG TCGAAGGCCG CGACGCCCTG
ACCATGGGCG TGCTGCGCCA GTCCCAGGCC AATACGGTGG CGATTTCCAA TCGCATCCGC
GCCGAGATCG ACCGCTTGCG TCCCAGCCTG CCCGAGGGGA TGAGCCTGGA GGTGTCGTCC
GACGACGCCC TGTTCATCAA CCGCTCGATC CACGAGGTGA TCTTGACCCT CGGCCTGTCG
GGGCTGATCG TCATCATCGT CAATTTCGCC TTTCTCGGCT CGATCCGCGC CACCTTGGTG
CCGACGGTGA CCATCCCGGT GGCGGTGATC GGCACCTTCA TCGGCATTTT GCTGCTGGGC
TTTTCGATCA ACCTGCTGAC CTTGCTCGCC TTGATCTTGT CGATCGGGCT GGTGGTCGAT
GACGCCATCG TCGTGCTTGA GAACATCCAG CGCCGCATCG AGGCCGGCGA GCCCAAGCTG
GTGGCGGCGG CGCGCGGCAC CCGGCAGGTC ACTTTCGCCG TGGTCGCCAC CTCGTTGACC
CTGATCGCCG TCTTCGTGCC GATTTCCTTC ATGGAGGGCA CGGTCGGCCG GCTGTTCACC
GAATTCGGTT TCGTGCTGGC CTGCGCGGTG GCGATCTCGA TGCTGGTCGC CCTGACGCTC
TGCCCGCCGC TGGCCGCTGG CGTGCTGGCC GAGGGCAAGG CCGAGGGCCG GCTGGCCCAT
GCCCTCAATT ACGCCTTCGG CACCCTGAGC CGGGGCTATC AGCGGGCCCT GTCGGCGGTT
CTCGGCCTGC CGATGGTCGT GTTGACGGTC GCCCTGCTCT GCGGCGGCGC GTCGTTCTGG
CTCTATCAGG GGCTGCCCAA GGAATTGGTT CCGGTCGAGG ATCGCGGGGT GGTGGTGGTC
AGCCTCAACG GACCGCAAGG GGCCAATACG CGTTATACCG ATACCCAAAT CCGCGCCGTG
GAGGCCGCCG TTCAGCCGGT GCTCGATCGC GGCGAGGCGG TGGGGGTTCT GGCCCAGGTC
GGCCAATGGA ACCGCCCCCA TCGTGGCTAT GTCGTCATCC GCCTGGACGA TTGGGAAAAC
CGCGGGCGCA CCGCCTCCGC CCTGGCCGAG AGCCTGCGCA AGGACCTGGG CAAGCTGGCC
GGGGCGACGG CGACGCCGGT GGTGCCCGCC GGCCTGGGGC TGCGCGGCAG CCGCACCCCC
TTGCAGGTGG TGATCGGCGG CCCCGATTAC GCCGAGGTCG AGGTCTGGGC CAACGCCCTG
CTCAAGCGGG CCGAGGAATT GCCCGGGTTG ATCAATCCCG AACTCGATTT CGAACAAAAC
CAACCCCAGC TCAGCGTCGG CATCGACCGC GACCGCGCCG ATGATCTGGG GGTCGGGGTG
GAGGCCATCG GCCAAACCCT GCAGACCATG CTGGCCTCGC GCGAGGTGAC GCGCTTCGTT
GATCGCGGGC GCGAGTATCA GGTGGTGGTC CAGGCCCGGC CCGAGGATCG GCGGACACCC
TCGGATTTGA GCAATACCTT CGTGCGCGCC GAAAAGGGCG GCGCTCTGGT GCCGCTCGAT
GCCCTGGTGA TCCTCAAGGA AACCGCCGGC GCCCCCGATC TCAATCGCTA CGCCCGCCTG
CCGTCGATCA CCTTGCAAAG CGCGCTGGCG CCCGGTTACG ACATGGGGCA GGCGATCGAC
GACGTGATGG CGCTCGCCAG CCAAACCGTG CCGCCCGAAG CCCGGCTTTC CCTGGCCGGG
CAATCCAAGG AATTCCTGGA AACCTCGGGG GGGGTGCTGT TCACCTTTTT GATGGCCCTG
GTCATCGTCT ATCTGGTGCT GGCCGCCCAG TTCGAAAGCT TCCTCCATCC TTTGATCATC
ATGCTGTCGG TGCCGCTGGC GGTGTCGGGG GCTTTGCTGT CGCTATGGGC GACGGGCAAT
TCGATCAATG TTTACAGCCA GATCGGCATC GTTTTGCTGA TCGGCCTGAC GGCGAAGAAT
GGCATCTTGA TCGTGGAGTT CGCCAATCAG CTGCGCGACG AGGGGCGAAG CGTGCGCGAG
GCCATCCTTG AAGCCGCCAG CCTGCGCCTG CGGCCGATCC TGATGACCGT CATCTGCACC
ATTCTTGGCG CGGTGCCGCT GGCCTGGTCG TCGGGGGCGG GGGCGGAAAG CCGCGAGGCG
ATCGGCATCG TCGTCATCGG CGGTCTGGGG CTGGCCTCGC TGCTCACCCT GTTCGTCACC
CCGGTTCTCT ATGATCTGCT GGCGCCCTTC ACCCGCTCGG CCGGCGCCGT GGGCCAAGCC
CTTGACCGCG CCCTGGCCGA AACCCCCGAG GGCGCGGGCA AGCCGGCGGA ATAA
|
|---|
| Protein sequence | MDVSSLFIRR PVFATVLSLL LVVMGIAAMT RLAVRELPDI DSAVVSVTTP YTGAAPEIVD
TDITEVIENA VAGVSGIRTI TSQSRRGQGR TVIEFESGVS MDEAVNDVRD AVAKVRGDLP
DDIEEPRIAK SDTDSDPVMR LSLTSPRMTP IELTDFADRY IVDRLATIDG VAQVDLYGER
RQAIRLWLDR RAMAARQVTV QDVEAALRRA NVELPAGEIE SASRLLTVRA ATLLTSPEAF
GSTVIKVVDG YPLRVRDVAR VELGVENDDT TVRVEGRDAL TMGVLRQSQA NTVAISNRIR
AEIDRLRPSL PEGMSLEVSS DDALFINRSI HEVILTLGLS GLIVIIVNFA FLGSIRATLV
PTVTIPVAVI GTFIGILLLG FSINLLTLLA LILSIGLVVD DAIVVLENIQ RRIEAGEPKL
VAAARGTRQV TFAVVATSLT LIAVFVPISF MEGTVGRLFT EFGFVLACAV AISMLVALTL
CPPLAAGVLA EGKAEGRLAH ALNYAFGTLS RGYQRALSAV LGLPMVVLTV ALLCGGASFW
LYQGLPKELV PVEDRGVVVV SLNGPQGANT RYTDTQIRAV EAAVQPVLDR GEAVGVLAQV
GQWNRPHRGY VVIRLDDWEN RGRTASALAE SLRKDLGKLA GATATPVVPA GLGLRGSRTP
LQVVIGGPDY AEVEVWANAL LKRAEELPGL INPELDFEQN QPQLSVGIDR DRADDLGVGV
EAIGQTLQTM LASREVTRFV DRGREYQVVV QARPEDRRTP SDLSNTFVRA EKGGALVPLD
ALVILKETAG APDLNRYARL PSITLQSALA PGYDMGQAID DVMALASQTV PPEARLSLAG
QSKEFLETSG GVLFTFLMAL VIVYLVLAAQ FESFLHPLII MLSVPLAVSG ALLSLWATGN
SINVYSQIGI VLLIGLTAKN GILIVEFANQ LRDEGRSVRE AILEAASLRL RPILMTVICT
ILGAVPLAWS SGAGAESREA IGIVVIGGLG LASLLTLFVT PVLYDLLAPF TRSAGAVGQA
LDRALAETPE GAGKPAE
|
|---|
| |