| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2050 |
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| Symbol | |
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| ID | 3835476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2370148 |
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| End bp | 2371428 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637826151 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_427137 |
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| Protein GI | 83593385 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTACTG TACCGTACAG TTTACTGACC GTCCACGCCT TTCGCCGTGA CGGCACACCG
ACACACCAAG AGATGCCCCC CATGATGCTC AGCAAGACAT TCCTGCGCCT GATGACGACC
GCCGCCCTGT CGGCGGTTCT ATGGAGCTGC GACTCGCAGG AAGGGGGGCA GGCGGCGGGT
GGCGCCCGAC CGGCCCCGGA AGTCACGGTG ATCACCGCCG CTCCGCAAAC CTTGCGGATC
ACCGAACGGC TTCCCGGTCG CACGGTGGCC TACCGCAGCG CCGAGGTCCG GCCCCAGGTC
AACGGCATCA TCCTCAAGCG CCTGTTCGAG GAGGGCACCG AGGTCACCGA GGGCCAGCAG
CTTTATCAGA TCGACCCGGC CACCTATAAG GCGGCCCTCG ATAGCGCCAA GGCCCAGCTC
GCCAAGGCCG ACGCCACGGT CAAATCGGCC CGGGCCAAGG CGGCGCGCTA TGGCGAGTTG
GTCAAGCTCA AGGCGGTCAG CCGTCAGGAT TATGACGACG TCACCGCCAC CCTGGCCGAA
AGCGTCGCCT CGGTCGCCGA TGCCCAGGCG ACCGTTGACG CCGCCGAAAT CAATTTGGCC
TATACCCGGG TCACCGCGCC GATTTCCGGG CGGATCGGCC GCTCGGCGGT CACCGAGGGC
GCCCTGGTGA CGGCCAATCA GGCCACGACC CTGGCGACGA TCACCCAGCT TGATCCCATC
AACGTCGATT TGACCCAGTC GAGCGACAAA CTGCTCAAGC TGCGCGCCCA GATGGCCAAT
GGCACGGTTC AGGCCCCGGA GCGGGTTCCC GTTACCCTGC AGATCGATAA TTCCGGCACG
CCCTACGGCC TGACCGGAAC CCTGCAGTTT TCAGAGGTCG TGGTTGACGA AACCACGGGC
ACGGTGCGCC TGCGCGCCAC CTTCCCCAAT CCCAACCGGA TCTTACTGCC CGGATTGTTC
GTACGCGCCA CCGTTGATTT CGGCAGCCGC GAGAACGTCT TTCTGATTCC CCAGCGCGCC
GTCGTCCGTG ACGCCTCGGG CAAGGCCGCC CTATGGGTGA TCGGCGACGG CGACAAGGCC
GAACGCCGGC CGGTTACCGC CGAAACCACC CAGGGCACCA ATTGGGTGGT CACCGAGGGC
CTGAAGGGCG GCGAGCGCAT CGTCATCGCC GGATTGCAAA GCATGGCGCC CGGCGCCCAG
GTCAAGGCCG TCGCCGCCCC GCCCGCGGGC CAGGAGGCGG GGCAACCCGC CGGCGGCCAG
CCCGCGCCCG CCGCGAAATA A
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| Protein sequence | MCTVPYSLLT VHAFRRDGTP THQEMPPMML SKTFLRLMTT AALSAVLWSC DSQEGGQAAG
GARPAPEVTV ITAAPQTLRI TERLPGRTVA YRSAEVRPQV NGIILKRLFE EGTEVTEGQQ
LYQIDPATYK AALDSAKAQL AKADATVKSA RAKAARYGEL VKLKAVSRQD YDDVTATLAE
SVASVADAQA TVDAAEINLA YTRVTAPISG RIGRSAVTEG ALVTANQATT LATITQLDPI
NVDLTQSSDK LLKLRAQMAN GTVQAPERVP VTLQIDNSGT PYGLTGTLQF SEVVVDETTG
TVRLRATFPN PNRILLPGLF VRATVDFGSR ENVFLIPQRA VVRDASGKAA LWVIGDGDKA
ERRPVTAETT QGTNWVVTEG LKGGERIVIA GLQSMAPGAQ VKAVAAPPAG QEAGQPAGGQ
PAPAAK
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