Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2033 |
Symbol | |
ID | 3835459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2346075 |
End bp | 2348675 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637826134 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_427120 |
Protein GI | 83593368 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCCGCC GAATGAGGGA CGGACTGCGT CAAGGGCTCG GCTCGACCTT GGGCCGGCGG GTGACGCGCA GCCTGCTGAT CGGCATCGTC GTGCTGGAGA TCCTGGTTGT GGCGCCTTCG GCGATCCTCC ACCGGCGCTC GCTTCTCGAT GATCTCGAGG CCGATGCCCG CGCCCTCGGC CTCGCCGCCG CCGCCCCGCC CGAGGCCAGC CTGGGCGAAT GGGGGCGTCG GCTTGGCGTG CTGCTCGGCG ACGAGCGGAT AACCGGGGCG CAATTGCTGC GCAACGACTT CGCCGTCGCC GGCATCGGCG ACCGTCCCGA CAGCCATCCG GGCAGCCAGG GCCGTCATGC CGATGATGGC CACAGCCTGG ACATCGCCAT CCCCTTGACC GCCAGCGAAA CCCTGACGCT GCGCCTGGAC AAGCATACGA TCACGAAAAA GCTGTGGACC GAGATCGGCT GGCTCGCCTT GATGACCTTG GTGATGGCCG CAGCCGTCAT CCTGATCGCG GCGATCGTGG CCGGGCGGCT GGTCTTGCTG CCCTTGCTCG ACCTGCGTCG GCTGGTGGTG GATATCCGGC CGGGCGAGGG ACGCGGCCCC TCGAGCGAGG CCATCGGACG CACCGATGAA TTGGGCGACC TGTTTCGCGC CGTCGAGGAC CTGCGCCGGC GCATCGAGAT GTCGCTGCTC GAGGCGGCGA CCCAGGCGCG TTTTCCCTCG GAAAATCCCA ATCCGGTGAT CAGGACCTCC GACTCCGGCG GCCTGCTTTA CGCCAATGCC TCGGCCCGAC TGCGGCCGGG GTTTCTGGAC GGCGAGACCT TGCATCCGAC GATCATCGCC CTGGTCCGCG AGACGACGGG TCGGGGCGAG ATCATGACCT CGGAAATCCG CCTGGGGACG CGGATCTACC TGTTGACCGC CGTTCCCATC ACCCACGACC GCTATGTCAA TATTTACGCC TCCGATGTCA CCGACCGGGT GAAGGCCGAA ATCGCCCTGC GCTCGCTTAA CGAATCCCTG GAGGCCCAGG TCCTGACGCG AACCCGCGAT CTTGCCGAAA GCGAGGCGCG AACGCGGGCC ATCATCGCCA CGATGGTCGA CGGCCTGATC GTCATGGACG ACCAGGGCCG TATCGACCTG TTCAACGCCG CCGCCCAAAG GATCTTCGGG TATGACGAGA GCGAGGTGGT CGGACAGAAC GCCGCCTTGT TGATGAGCGC CGAAGACGCC GCCGGCCACG CCGAGCCTTT CGGGCTTCAT CTGTGGGATG GCCGATCGCC CCTCCTCAAC GGCACCCGCA AGGTCATCGG CCGGCGCAAG AATGGCGCGT CGTTTCCCCT GGCCGTGGCG ATCAGCGCGC TTCCGGCGCC CCCGCCCGGC GGCGCGCCGG CCCGCCGGCT GTTCACCGGC GTCGTCCGCG ATATTTCCGA TCAGATCCGC CATGAAAGCG ATCTGCGCAA GGTCAAGGAC GAAGCCGAAG TCGCCAATCG GGCGAAATCG GACTTTCTGG CGGTGATGAG CCATGAATTG CGCACCCCGC TCAACGGCGT TCTGGGAATG GCCGATCTGT TGTGCGACAC GCCCCTTGAT GCCGAACAAC GGCGCTATAC CCGCACCATC GCCATCTCGG CCGAGGCCCT GCTGGTGATC ATCAACGATA TTCTCGATCT GTCCAAGATC GAGGCCGGTC ATCTTGATCT GGAAAGTCGC CCCTTCGATC CCGCCACCCT GCTCGAAGGG GTGCGGACCT TGATGGAGGG GCCGGCCCGC GACAAGGCCA TCGCCCTGCG CACCTCGATC GAAGGGGCGA AGCCGCCGCT CCGCCTGGGC GACGAGGGCC GCCTGCGCCA GATCCTGCTC AATCTCGCCA ACAACGGCGT GAAGTTCACC GAAAAGGGCT CGCTTACCCT GCGCCTGAAA GCCGGCACGG GCGGAGCCTT GCGCTTCGAG GTCGAAGACA CCGGGATCGG CATCCCCAAG GAAAAACAAG ACACGCTATT TCACGACTTC ACCCAGGTGT CGGCCTCGAC CGCCCGGCGC TTTGGCGGCA GCGGGCTGGG GTTGTCGATC TGTCGGCGGC TGGTCGGGCT GATGGGCGGG CGCCTTGGCT TTGACAGCAC CCCGGGCGTT GGCAGCCTTT TTTGGTTCGA GGTCGATCTG CCCGAAGTCG TCGCCAGCCA ATCGCCGCCC CCCCCTCCCT TCCAGGGCCC ACCGCTGTCG ATCCTGGTGG TCGAAGACAA CGAGATCAAC CGTCAGGTCG CCCTTGGGCT GTTGACCAAG CTGGGCCACC GGGTCACCTG TGTCGATGAC GGCGCCGCCG CCGTGCGGGT CGTCGACACC ATGCCCTTCG ACCTGATCTT GATGGATGTC CAGATGCCGG GCATGGATGG CTATGAAGCC ACCCGTCTTA TTCGCGGCAA GCCGGCGCCG GTGGGCGGCC TGCCCATCGT CGCCATGACC GCCAATGCCA CCAGCGGGGA TGTGGCGGCG GCGATGGCGG CGGGCATGAC CGGCTATCTG TCCAAGCCGA TCACCCGCAA GCGTCTGGCC GAGGCCTTGA TGGCCCACGG TCCCGGAGCG ACGGTCTCGA CGACGGGGTA A
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Protein sequence | MPRRMRDGLR QGLGSTLGRR VTRSLLIGIV VLEILVVAPS AILHRRSLLD DLEADARALG LAAAAPPEAS LGEWGRRLGV LLGDERITGA QLLRNDFAVA GIGDRPDSHP GSQGRHADDG HSLDIAIPLT ASETLTLRLD KHTITKKLWT EIGWLALMTL VMAAAVILIA AIVAGRLVLL PLLDLRRLVV DIRPGEGRGP SSEAIGRTDE LGDLFRAVED LRRRIEMSLL EAATQARFPS ENPNPVIRTS DSGGLLYANA SARLRPGFLD GETLHPTIIA LVRETTGRGE IMTSEIRLGT RIYLLTAVPI THDRYVNIYA SDVTDRVKAE IALRSLNESL EAQVLTRTRD LAESEARTRA IIATMVDGLI VMDDQGRIDL FNAAAQRIFG YDESEVVGQN AALLMSAEDA AGHAEPFGLH LWDGRSPLLN GTRKVIGRRK NGASFPLAVA ISALPAPPPG GAPARRLFTG VVRDISDQIR HESDLRKVKD EAEVANRAKS DFLAVMSHEL RTPLNGVLGM ADLLCDTPLD AEQRRYTRTI AISAEALLVI INDILDLSKI EAGHLDLESR PFDPATLLEG VRTLMEGPAR DKAIALRTSI EGAKPPLRLG DEGRLRQILL NLANNGVKFT EKGSLTLRLK AGTGGALRFE VEDTGIGIPK EKQDTLFHDF TQVSASTARR FGGSGLGLSI CRRLVGLMGG RLGFDSTPGV GSLFWFEVDL PEVVASQSPP PPPFQGPPLS ILVVEDNEIN RQVALGLLTK LGHRVTCVDD GAAAVRVVDT MPFDLILMDV QMPGMDGYEA TRLIRGKPAP VGGLPIVAMT ANATSGDVAA AMAAGMTGYL SKPITRKRLA EALMAHGPGA TVSTTG
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