Gene Rru_A2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2033 
Symbol 
ID3835459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2346075 
End bp2348675 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content66% 
IMG OID637826134 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_427120 
Protein GI83593368 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCGCC GAATGAGGGA CGGACTGCGT CAAGGGCTCG GCTCGACCTT GGGCCGGCGG 
GTGACGCGCA GCCTGCTGAT CGGCATCGTC GTGCTGGAGA TCCTGGTTGT GGCGCCTTCG
GCGATCCTCC ACCGGCGCTC GCTTCTCGAT GATCTCGAGG CCGATGCCCG CGCCCTCGGC
CTCGCCGCCG CCGCCCCGCC CGAGGCCAGC CTGGGCGAAT GGGGGCGTCG GCTTGGCGTG
CTGCTCGGCG ACGAGCGGAT AACCGGGGCG CAATTGCTGC GCAACGACTT CGCCGTCGCC
GGCATCGGCG ACCGTCCCGA CAGCCATCCG GGCAGCCAGG GCCGTCATGC CGATGATGGC
CACAGCCTGG ACATCGCCAT CCCCTTGACC GCCAGCGAAA CCCTGACGCT GCGCCTGGAC
AAGCATACGA TCACGAAAAA GCTGTGGACC GAGATCGGCT GGCTCGCCTT GATGACCTTG
GTGATGGCCG CAGCCGTCAT CCTGATCGCG GCGATCGTGG CCGGGCGGCT GGTCTTGCTG
CCCTTGCTCG ACCTGCGTCG GCTGGTGGTG GATATCCGGC CGGGCGAGGG ACGCGGCCCC
TCGAGCGAGG CCATCGGACG CACCGATGAA TTGGGCGACC TGTTTCGCGC CGTCGAGGAC
CTGCGCCGGC GCATCGAGAT GTCGCTGCTC GAGGCGGCGA CCCAGGCGCG TTTTCCCTCG
GAAAATCCCA ATCCGGTGAT CAGGACCTCC GACTCCGGCG GCCTGCTTTA CGCCAATGCC
TCGGCCCGAC TGCGGCCGGG GTTTCTGGAC GGCGAGACCT TGCATCCGAC GATCATCGCC
CTGGTCCGCG AGACGACGGG TCGGGGCGAG ATCATGACCT CGGAAATCCG CCTGGGGACG
CGGATCTACC TGTTGACCGC CGTTCCCATC ACCCACGACC GCTATGTCAA TATTTACGCC
TCCGATGTCA CCGACCGGGT GAAGGCCGAA ATCGCCCTGC GCTCGCTTAA CGAATCCCTG
GAGGCCCAGG TCCTGACGCG AACCCGCGAT CTTGCCGAAA GCGAGGCGCG AACGCGGGCC
ATCATCGCCA CGATGGTCGA CGGCCTGATC GTCATGGACG ACCAGGGCCG TATCGACCTG
TTCAACGCCG CCGCCCAAAG GATCTTCGGG TATGACGAGA GCGAGGTGGT CGGACAGAAC
GCCGCCTTGT TGATGAGCGC CGAAGACGCC GCCGGCCACG CCGAGCCTTT CGGGCTTCAT
CTGTGGGATG GCCGATCGCC CCTCCTCAAC GGCACCCGCA AGGTCATCGG CCGGCGCAAG
AATGGCGCGT CGTTTCCCCT GGCCGTGGCG ATCAGCGCGC TTCCGGCGCC CCCGCCCGGC
GGCGCGCCGG CCCGCCGGCT GTTCACCGGC GTCGTCCGCG ATATTTCCGA TCAGATCCGC
CATGAAAGCG ATCTGCGCAA GGTCAAGGAC GAAGCCGAAG TCGCCAATCG GGCGAAATCG
GACTTTCTGG CGGTGATGAG CCATGAATTG CGCACCCCGC TCAACGGCGT TCTGGGAATG
GCCGATCTGT TGTGCGACAC GCCCCTTGAT GCCGAACAAC GGCGCTATAC CCGCACCATC
GCCATCTCGG CCGAGGCCCT GCTGGTGATC ATCAACGATA TTCTCGATCT GTCCAAGATC
GAGGCCGGTC ATCTTGATCT GGAAAGTCGC CCCTTCGATC CCGCCACCCT GCTCGAAGGG
GTGCGGACCT TGATGGAGGG GCCGGCCCGC GACAAGGCCA TCGCCCTGCG CACCTCGATC
GAAGGGGCGA AGCCGCCGCT CCGCCTGGGC GACGAGGGCC GCCTGCGCCA GATCCTGCTC
AATCTCGCCA ACAACGGCGT GAAGTTCACC GAAAAGGGCT CGCTTACCCT GCGCCTGAAA
GCCGGCACGG GCGGAGCCTT GCGCTTCGAG GTCGAAGACA CCGGGATCGG CATCCCCAAG
GAAAAACAAG ACACGCTATT TCACGACTTC ACCCAGGTGT CGGCCTCGAC CGCCCGGCGC
TTTGGCGGCA GCGGGCTGGG GTTGTCGATC TGTCGGCGGC TGGTCGGGCT GATGGGCGGG
CGCCTTGGCT TTGACAGCAC CCCGGGCGTT GGCAGCCTTT TTTGGTTCGA GGTCGATCTG
CCCGAAGTCG TCGCCAGCCA ATCGCCGCCC CCCCCTCCCT TCCAGGGCCC ACCGCTGTCG
ATCCTGGTGG TCGAAGACAA CGAGATCAAC CGTCAGGTCG CCCTTGGGCT GTTGACCAAG
CTGGGCCACC GGGTCACCTG TGTCGATGAC GGCGCCGCCG CCGTGCGGGT CGTCGACACC
ATGCCCTTCG ACCTGATCTT GATGGATGTC CAGATGCCGG GCATGGATGG CTATGAAGCC
ACCCGTCTTA TTCGCGGCAA GCCGGCGCCG GTGGGCGGCC TGCCCATCGT CGCCATGACC
GCCAATGCCA CCAGCGGGGA TGTGGCGGCG GCGATGGCGG CGGGCATGAC CGGCTATCTG
TCCAAGCCGA TCACCCGCAA GCGTCTGGCC GAGGCCTTGA TGGCCCACGG TCCCGGAGCG
ACGGTCTCGA CGACGGGGTA A
 
Protein sequence
MPRRMRDGLR QGLGSTLGRR VTRSLLIGIV VLEILVVAPS AILHRRSLLD DLEADARALG 
LAAAAPPEAS LGEWGRRLGV LLGDERITGA QLLRNDFAVA GIGDRPDSHP GSQGRHADDG
HSLDIAIPLT ASETLTLRLD KHTITKKLWT EIGWLALMTL VMAAAVILIA AIVAGRLVLL
PLLDLRRLVV DIRPGEGRGP SSEAIGRTDE LGDLFRAVED LRRRIEMSLL EAATQARFPS
ENPNPVIRTS DSGGLLYANA SARLRPGFLD GETLHPTIIA LVRETTGRGE IMTSEIRLGT
RIYLLTAVPI THDRYVNIYA SDVTDRVKAE IALRSLNESL EAQVLTRTRD LAESEARTRA
IIATMVDGLI VMDDQGRIDL FNAAAQRIFG YDESEVVGQN AALLMSAEDA AGHAEPFGLH
LWDGRSPLLN GTRKVIGRRK NGASFPLAVA ISALPAPPPG GAPARRLFTG VVRDISDQIR
HESDLRKVKD EAEVANRAKS DFLAVMSHEL RTPLNGVLGM ADLLCDTPLD AEQRRYTRTI
AISAEALLVI INDILDLSKI EAGHLDLESR PFDPATLLEG VRTLMEGPAR DKAIALRTSI
EGAKPPLRLG DEGRLRQILL NLANNGVKFT EKGSLTLRLK AGTGGALRFE VEDTGIGIPK
EKQDTLFHDF TQVSASTARR FGGSGLGLSI CRRLVGLMGG RLGFDSTPGV GSLFWFEVDL
PEVVASQSPP PPPFQGPPLS ILVVEDNEIN RQVALGLLTK LGHRVTCVDD GAAAVRVVDT
MPFDLILMDV QMPGMDGYEA TRLIRGKPAP VGGLPIVAMT ANATSGDVAA AMAAGMTGYL
SKPITRKRLA EALMAHGPGA TVSTTG