Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2014 |
Symbol | |
ID | 3835439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2328282 |
End bp | 2329886 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637826114 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_427101 |
Protein GI | 83593349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.533924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTGT CCCGCAGAAG TTTTCTTGCC TCAACCGCCC TTCTGGCGGG AGCGGCGGCC CTGCCGCGTT TCTCCTGGGC GCAGGGCGCC CCGGCGCCGG TCGCCGGCGG CGTGTTGACC GCCCATCTCA GTTCCGAGCA GCGCATCCTC AATCCGGCGC TGCGCGCCTC GACGGGGGTC TATGTCATCA CCAGCAAGAT CATCGAATCG CTGGTTGATC TTGGCCCCGA TGGCGCGCCG ACGCCGGTTC TCGCCACGCG TTGGGAGGCC GCCGCCGATG GCAAATCGGT GACCTTCACC CTGCGCGAGG GGGTGAAGTG GCACGACGGC AAGCCCTTCA CCTCGGCCGA CGTTCAGTAT TCGGCGATGG AGCTGTGGAA GAAGCACCTG AATTACGGCA CCCAGCTTCA GCGCTATCTG GAAGCCGTCG ACACCCCCGA CGCCACCACG GCGATCTTCC GCTATAGCCG GACCATGCCG CTGCCCCTGT TGCTGCGCGC CCTGGCCGAT CTGGGCTATG TCGTGCCGCG CCATCTGTTC GAGGGCACCA ACGTTCTGGA AAACCCGGCG AATACGGCGC CGATCGGTAC CGGTCCGTTC AAATTCGTCG AATACCAGCG CGGCCAGTAT ATCGTCGCCG AGCGCAATCC CGAGTATTGG CGGAAGGGCG AACCCTATCT CGACCGCGTC GTCTGGCGCT TCATCACCGA TAAATCGGCC GCCAGCGCCG CCCTGGAAAC CGGGCAGGTG CAGATCAGCG CCTATACCCA GCTCGCCCTG TCGGACATCG AACGCCTGGC CAAGGATTCG CGCTTCGAGG TGTCGTCGCG CGGCAACGAG GCCAATTCGT TCAACAATAC GGTCGAGTTC AACCATCGCC GCAAGGAACT GGCCGATGTC CGCGTCCGCC GCGCCATCGC CCATGCCGTC GATGTCGATT TCTTCGTCGA GAACTTCCTC TATGGGCGCG GCAAGCGGGC GACCGGCTTC ATCCCGTCGA TTTCCCAGGC CTTTTATCCG GGCGGCGCCT TCCCCTATCC GTTTGACACC AAGAAGGCCG AGGCCCTGCT CGACGAGGCC GGCTATCCGC GCCAAAAGGG CGGCGAGCGC TTTTCGCTGC GCCTGTTGCC GATCCTGAAC GGCGAGGATG TGCCCCAGTT CGCCACCTTC CTTCAGCAGT CGCTGGCCGA GGTCGGCATC AAGGTCGAGA TCGTCCAGCT TGATGTCGCT GGCGCCCTGT CGGCGATCTA CAAGGATTGG AACTTCGATC TGGCGACCGG CTGGCACCAG TATCGGGGCG ATCCGGCGGT GTCGACCACC GTGTGGTTCC GCTCGGGTAG CCCCAAGGGC GCGCCGTGGA CCAACCAGTT CGGTTGGGAA TCGGCCGAGG TCGATACGCT GATCGACGAT GCCGCCGCCG AGATCGATCC GGTCAAGCGC AAGGCCCTTT ACGCCCAATT GGTCGATGTG ATCAACGAAG AGTTGCCGGT GTGGTTCGCC ACCGAGCGGC AATTCGTGTC GGTCACCAAT AAAGTCGTCC AAAACCACCA TAATATCCCG CGCTGGCCGT CCAGTGACTG GCATGATACC TGGATTGCCA AGTAG
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Protein sequence | MSLSRRSFLA STALLAGAAA LPRFSWAQGA PAPVAGGVLT AHLSSEQRIL NPALRASTGV YVITSKIIES LVDLGPDGAP TPVLATRWEA AADGKSVTFT LREGVKWHDG KPFTSADVQY SAMELWKKHL NYGTQLQRYL EAVDTPDATT AIFRYSRTMP LPLLLRALAD LGYVVPRHLF EGTNVLENPA NTAPIGTGPF KFVEYQRGQY IVAERNPEYW RKGEPYLDRV VWRFITDKSA ASAALETGQV QISAYTQLAL SDIERLAKDS RFEVSSRGNE ANSFNNTVEF NHRRKELADV RVRRAIAHAV DVDFFVENFL YGRGKRATGF IPSISQAFYP GGAFPYPFDT KKAEALLDEA GYPRQKGGER FSLRLLPILN GEDVPQFATF LQQSLAEVGI KVEIVQLDVA GALSAIYKDW NFDLATGWHQ YRGDPAVSTT VWFRSGSPKG APWTNQFGWE SAEVDTLIDD AAAEIDPVKR KALYAQLVDV INEELPVWFA TERQFVSVTN KVVQNHHNIP RWPSSDWHDT WIAK
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