| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1970 |
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| Symbol | |
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| ID | 3835394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2277487 |
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| End bp | 2279214 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637826069 |
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| Product | PTS fructose IIC component |
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| Protein accession | YP_427057 |
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| Protein GI | 83593305 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.239904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGT TTATCGCGGT CGTCGGCGGG GGCGAGCGGA GCACCCAGGC GCTGCTGGTC
GCCGAGGCCC TGCGCCGGGC CGCCAGCGGG GCGGGGCACC GCATCGATAT CGAGGTGCGC
AGCGATCAGG GCGTGGTCAA CGCCTTGAGC GACGACGCCA TCGTGCGCGC CAGGGCGGTG
ATCCTGATCG GCACCGGCGA TCTGGATGTC GGGCGCTTTC CCGGGTTGCC CAAGCTTGAA
ACCACCATCG AGGCGGTGCT GGCCGATGTG GGGGCGGTTC TCGGGCGGGC CGAGGGGGCC
GAATTGGCCG GAAGCGTCGC CGCCACTGAC GACGGGGTGC GGCGCATCGT CGCCATCACC
TCCTGCCCGA CCGGCATCGC CCATACCTTC ATGGCCGCCG AGGGCATCAC CCAGGCGGCC
AAGGCTTTGG GCTATCAGGC CAGGGTCGAG ACCCAGGGCT CGGTGGGATC GCGCGACACC
TTAAGCGACG ACGAGATCGC CCAGGCCGAT ATCGTGCTGA TCGCCGCCGA TACCCAGATC
GATCTGGCGC GCTTCGACGG CAAGCGGGTG TTCCTGTCGG GCACCAAGCC GGCGATCGCC
GATGGCAAGG CGCTGATCGC CCGCGCCCTG GCCGAGGCGA CGCTGCAAGG CGGCAAGAAA
TCCCTGGTCG ATACGGTGGA GGCGGGCAAG GCCCAGCGCT CGGCCCAGCG CACGGGGGCC
TATAAGCACC TGATGACCGG CGTGTCCTTC ATGCTGCCCT TCGTCGTCGC CGGCGGGTTG
CTGATCGCCC TGGCCTTCGC CTTGGGCGGC ATCAACGCCT TTGACGAGGC CAATAAGGGA
ACGCTGGCCT ATGACCTGTT CCAGATCGGC GCCAAAAGCG CCTTCGTGCT GATGGTTCCG
GCCCTGGCCG GCTATATCGC CTTTTCCATC GCCGACCGGC CGGGCATCGC CCCGGGCATG
ATCGGCGGTC TGGTCGCGGC CAATCTGGGG GCGGGTTTCC TGGGCGGCAT CATCGCCGGC
TTCATCGCCG GCTATGTCAC GGCTTGGTTC AATCGCACCA TCCGGCTGCA CCGCAATCTT
GAAGGGTTGA AGCCGGTCCT GATCCTGCCC GTGCTGGGCA CCGTCGTGAC CGGCTTGCTG
ATGATCTATG TCGTCGGCAC GCCGGTGGCC GGGCTGTTGT CGTGGTTGAC CGAGGCCTTG
CGCGGCATGC AGGGCAGCAG CGCCATCGTG CTCGGGCTGT TGATCGGGGC GATGATGGCC
TTCGATATGG GCGGCCCGGT CAATAAGGCG GCCTATGCCT TTTCCACCGG CCTGCTGGCC
AGCGAGGTCT ATACGCCGAT GGCGGCGGCC ATGGTGGCGG GGATGACCCC GGCCCTGGGC
GTGGCCCTGG CCAGCCGGCT GTTTCGCAGC CGCTTCACCG CCAGCGAACG CGAGGCCGGC
GGGGCGGCGG CGGTGCTGGG GCTGGCCTTC ATCACCGAAG GCGCCATTCC CTTCGCTGCC
TCCGATCCCT TCCGCGTCAT TCCGGCGCTG ATGGCCGGAT CGGCGGCGGC CGGGGCGATC
TCGATGACGG TGGGAGCGGA GCTGAAAGTC CCCCACGGCG GCATTTTCGT GCTGCCGATC
CCCAATGCCG TCACCCATTT GCTGGGCTAT ATCGTCGCCC TGGTCGTTGG CACCCTGATC
ACCGCCCTGG TGCTGCGGAT CACCAAACGC CCGGTGGCTG TTCTTTAG
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| Protein sequence | MSQFIAVVGG GERSTQALLV AEALRRAASG AGHRIDIEVR SDQGVVNALS DDAIVRARAV
ILIGTGDLDV GRFPGLPKLE TTIEAVLADV GAVLGRAEGA ELAGSVAATD DGVRRIVAIT
SCPTGIAHTF MAAEGITQAA KALGYQARVE TQGSVGSRDT LSDDEIAQAD IVLIAADTQI
DLARFDGKRV FLSGTKPAIA DGKALIARAL AEATLQGGKK SLVDTVEAGK AQRSAQRTGA
YKHLMTGVSF MLPFVVAGGL LIALAFALGG INAFDEANKG TLAYDLFQIG AKSAFVLMVP
ALAGYIAFSI ADRPGIAPGM IGGLVAANLG AGFLGGIIAG FIAGYVTAWF NRTIRLHRNL
EGLKPVLILP VLGTVVTGLL MIYVVGTPVA GLLSWLTEAL RGMQGSSAIV LGLLIGAMMA
FDMGGPVNKA AYAFSTGLLA SEVYTPMAAA MVAGMTPALG VALASRLFRS RFTASEREAG
GAAAVLGLAF ITEGAIPFAA SDPFRVIPAL MAGSAAAGAI SMTVGAELKV PHGGIFVLPI
PNAVTHLLGY IVALVVGTLI TALVLRITKR PVAVL
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