Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1936 |
Symbol | |
ID | 3835360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2242670 |
End bp | 2244469 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637826035 |
Product | ErfK/YbiS/YcfS/YnhG |
Protein accession | YP_427023 |
Protein GI | 83593271 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.659537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATCG GCAGTTTTCC CGGTAAAGGC GTCCTCCGGG GCGCGACCTT CGGAGCGGTC CTTGGGCGTG GTGCTCTGAT GGGTGTTTTC GCCGCCGCCC TTTTCGTGCC GGCCGTCCTC GCCTCGACCA GCCTGAACCC GCCAAGCGAT CCTCTGGCCA TCGGTCCGGG CACCCCGACC TATTCGCCCA GTTCCGCCAC CCTGCCGCCT TTGGCCGCGC CGTCGGCGGC CGTTGCCCGC CCGGGGCTGG CCGTGGCCGA GTCCAAAAAC GATGCCGCCG CCCGTCTGGC CAAGACCTAT CGTGACCACC ACGGCGGCAA GCCGCTGTGG ATGAGCGGGG CGGCGGCCTC GCCGCGCGGG CTCGCCCTGA TCGCCGCCCT GGAGGGCGCG TCCGAAGAGG GGATCGACCG CGAGGCCTAT CGCCTGGGCG AGATCAAGCG GCTGCTGGCG CGCACCACCC CCGCCGATGC CCAGACCGCC GATCTGCTGA TGGGCCGGGC ATTTTTGCTT TTCGCCACCG ATCGTCTGCT TGGGCAAAGC CGGCGCGCTC TGCCCTTTAG CGAGCGTCTG GCCCTTCTCG CGCGCGAGGA GGGGGTGATC CCCGAGGATT TGCTGGCCAA TGCCGGCGCC GCGCCCGACT TCGGCCTGTT CCTGGCGACC CTGGCGCCGC CGACGCCCCA ATACGACCTG TTGCGCCAGG GGCTAGTCCG CTATCAGGCT TTGGCCCGCG ACGGTGGTTG GCCGACCGAT CTGGCCGATG GCGCCTCGAT CAAGCCGGGC GATCGCGATC CGCGCCTGCC CGAGATGCGG CGGCGTCTGG CGGCCGAGGG ACTCGTCGTG GGAAGTGATC CGACCTTCAT CGGCCCGCCG GACGCCGAGC TGTTGGATGA CTTCCTGGTC GAGGCGGTCC GCATCTTCCA GGCCGCTCAC GGGCTGAGCG CCGATGGCGT GATCGGTCGC GGTACGCTGG TCGACATGAA CACCACCCCG GCCCAGCGCA TCACCCAGAT CCGCGTCGCC CTGGAACGTT GGCGGCTGTT GCCGCGCGCC CTTGGCCAGA CCCATCTGCT GGTCAATGTG CCCCAATATC AGCTTTATCT GAACGAGGGG CGGACGACGG TCTTGTCGAT GCGGGTGGCG GTCGGCCGCC AGGATTTCGA AACGCCGCTG TTTAGCGACA CCCTGCGCTA CATGGAATTC AACCCCTATT GGAACGTGCC GATCTCGATC GCCCAGGCCG AGGTCATTCC CAAGCAGATC GAGAATTCGG CTTATCTGGC CAAAAAGGGC TTCACCGTTC TGCCCCGTGG GGTCGAGGGC TGGGATGACG GCGTCGGTCA TGAGTCGGTG GATTGGAAGG CCGACGCGGC GCGCAGCTAT CGCCTGCGCC AGGATCCCGG ACCGGCCAAT CCGCTGGGTA CGGTGAAGTT CATGTTCCCC AATGAATATG CGGTCTATCT CCACGACACC AACAGCCGGG GGGTCTTCGA TCGCAGCGCC CGGGCGGTCA GCCATGGCTG CGTGCGCGTG CAGGAACCGG CGCTGCTGGC CAATTACATC CTTGAACGCT TTACCGACCG GATCGGCAAG ACGGCGGCGG ATTTCTCCGG CCCAACCCCC AAGGTCGTCC GTCTCAATCG CCCGCTGCCC ATCCATCTGG TCTATATCAC CGCCTGGGGC GGCGAGGGCG GCAAGGTGGC CTTCGTGCGC GATATCTATG CCAAGGATCG GGCGATCCGT CAGGCCTTGC ACGATACCGC CGCCTCGCCC GACGCCGACG CCACCCTGGC GGCGAAATAG
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Protein sequence | MTIGSFPGKG VLRGATFGAV LGRGALMGVF AAALFVPAVL ASTSLNPPSD PLAIGPGTPT YSPSSATLPP LAAPSAAVAR PGLAVAESKN DAAARLAKTY RDHHGGKPLW MSGAAASPRG LALIAALEGA SEEGIDREAY RLGEIKRLLA RTTPADAQTA DLLMGRAFLL FATDRLLGQS RRALPFSERL ALLAREEGVI PEDLLANAGA APDFGLFLAT LAPPTPQYDL LRQGLVRYQA LARDGGWPTD LADGASIKPG DRDPRLPEMR RRLAAEGLVV GSDPTFIGPP DAELLDDFLV EAVRIFQAAH GLSADGVIGR GTLVDMNTTP AQRITQIRVA LERWRLLPRA LGQTHLLVNV PQYQLYLNEG RTTVLSMRVA VGRQDFETPL FSDTLRYMEF NPYWNVPISI AQAEVIPKQI ENSAYLAKKG FTVLPRGVEG WDDGVGHESV DWKADAARSY RLRQDPGPAN PLGTVKFMFP NEYAVYLHDT NSRGVFDRSA RAVSHGCVRV QEPALLANYI LERFTDRIGK TAADFSGPTP KVVRLNRPLP IHLVYITAWG GEGGKVAFVR DIYAKDRAIR QALHDTAASP DADATLAAK
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