Gene Rru_A1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1908 
Symbol 
ID3835332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2211932 
End bp2213491 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content63% 
IMG OID637826007 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_426995 
Protein GI83593243 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCGGA AACAGCTAAA TCATATAAAA TGTAGAGAAA ATTGTTCGCT TGTCGCCAAG 
GCCGGATTTC GGCACCGTAG GGTCATAATC CAGGGGATAC AGTCAGCTAT GGTGCAAGAC
AGCGACGAGA TCTTGTTTGT CGAGGAAGAG GATCCCGTCG CAGGTTCCTT GCCTTCCGAT
GTGTCGCCCT GGAAGGTTTT GGTCGCCGAT GACGATCCCG AAGTCTTCAC GGTGACCCGG
CTGGTGCTGT CGGGATTTGT TTTCGCCGGG CGTGGCGTAT CCTTGCTTTA CGCCGGTTCG
GCGGCGGAAG CGACTGAAAT ACTCAGGCAA CAGTCCGATA TCGCCGTCGC CCTGCTTGAT
GTGGTGATGG AAACCGAGGA CGCCGGCCTA AAGCTGGTCA AGGTTATCCG CGATGACCTG
GGCAACAGTC ATTTGCGGAT TGTCTTGCGA ACCGGCCAGC CCGGGCAGGC GCCCGAACAC
GACGTGGTTA TGCGCTATGA CATCAACGAT TATCGCTCCA AGACCGAACT GACCGATACC
AAGCTGATCA CCACCCTGGT GTCGTCCCTG CGCTCCTATC AGCAGATCGA AGCCCTTGAA
CGCAGCCGCG CCGAACTGCG CGAAGCCCGT GATACCCTGG AGATCCGCGT CGCCGAACGC
ACCCGCGACC TGCGCGAAAG CGAGGCCCGG CTGCGCTCGA TCCTCGACGC CTCGGTTTTT
CCGATCCTGG TGCTGAGCGA GGAGGGCGAC CGGGTACGCT TTCTCAACGA TCACGCCGGC
GAGGCCCTGG GCTGGGCGCT TCTTGAGAAC ACCACGTCGA CGCTGCCCGA CCTGTGGGAA
AACCCCGTCG ATGGCGCCCG TTTGCTGGCG CGCACGGTCC AGCGCGGTCG GGTGCTCGAC
TGCGAATTCC GCTTGCGCGG GGCGGGCGGC GAGCCGTTCT GGGCCCTGGT CTCGACCATC
GCCATGTCCT ATGACGGGCA GCCGGCGGTC TTGCTGTCGT TTAATGACAT CACCGTTCAC
AAGCAGCGCG AGGAAGCCTG GCAGCGCTTG GCCCTGACCG ACCCGCTGAC CGGCCTGGGC
AATCGCCGGC TGCTGTTCGA TCGCGGCATC CTCGAGGTCG CCCGGGCGCG TCGCGGTTGT
TGGCCGCTTT CGGGGCTGAT GATCGATCTT GATCACTTCA AGCGGATCAA TGACACCCAG
GGCCATGCGG CGGGTGATGC GATCTTGCGC ACCCTGGCCG ATACCCTGCG CGAAAGCCTG
CGCGAGATCG ATGTCATCGC CCGCGTCGGC GGCGAGGAAT TCGCCATTCT GCTGCCCGAC
ACCTCCTTGA CGGCGGCCCA TGAGGTCGGC GAAAGGCTGC GGCTGTCGTG TCAGATCCCC
CAGCCCGTCG GCGGTCCGGT GACGATCAGC GTCGGCATCT CCACCCTGCA TCCCGAGGAT
CGTGGGCTGG GGGATATGTT GTCGCGCGCC GACGATGCGC TCTATCGGGC CAAGCGCAAC
GGCCGCGACC GGGTGGAAAT CGCCGATGAC TCTGAAGACA ATCAGGACGT CAGCCCCTGA
 
Protein sequence
MGRKQLNHIK CRENCSLVAK AGFRHRRVII QGIQSAMVQD SDEILFVEEE DPVAGSLPSD 
VSPWKVLVAD DDPEVFTVTR LVLSGFVFAG RGVSLLYAGS AAEATEILRQ QSDIAVALLD
VVMETEDAGL KLVKVIRDDL GNSHLRIVLR TGQPGQAPEH DVVMRYDIND YRSKTELTDT
KLITTLVSSL RSYQQIEALE RSRAELREAR DTLEIRVAER TRDLRESEAR LRSILDASVF
PILVLSEEGD RVRFLNDHAG EALGWALLEN TTSTLPDLWE NPVDGARLLA RTVQRGRVLD
CEFRLRGAGG EPFWALVSTI AMSYDGQPAV LLSFNDITVH KQREEAWQRL ALTDPLTGLG
NRRLLFDRGI LEVARARRGC WPLSGLMIDL DHFKRINDTQ GHAAGDAILR TLADTLRESL
REIDVIARVG GEEFAILLPD TSLTAAHEVG ERLRLSCQIP QPVGGPVTIS VGISTLHPED
RGLGDMLSRA DDALYRAKRN GRDRVEIADD SEDNQDVSP