Gene Rru_A1864 details

Gene Information

• Locus tag: Rru_A1864
• Symbol: smpB
• ID: 3835288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 2161057
• End bp: 2161539
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637825963
• Product: SsrA-binding protein
• Protein accession: YP_426951
• Protein GI: 83593199
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGCG CTGGCAATAG CCTGATATCC CACGGACGGG TGGCGGAAAA CCGCCGGGCC 
CGGCATGACT ACTCCATCGA GGAGACGATC GAGGCCGGGC TTATCCTGGT GGGAACCGAG 
GTCAAGTCGC TGCGGACCGG CCGGGCCAAT ATCGCCGATT CCTACGCCGG GCCGAAAAGC 
GGCGAGCTGT ATCTTTACAA CGCCTATATC CCCGATTGGA CCCAGGCGGT GAAGGCCTTC 
GCCCACGAGC CGCGCCAGCC GCGCAAGCTG CTGGTTCATC GGCGCGAGGC CCGGCGCCTG 
ATCAGCGCCA TCAACAAGGA CGGCATGACC CTGGTGCCGC TCTACCTTTA TTTCAACGAT 
CGCGGTTTCG CCAAGGTTCA GCTTGGTTTG GCCAAGGGCC GCAAGGCCCA TGACAAACGT 
CAGGCGATCA AGGAGCGCGA ATGGAACCGC GACAAGGCTC GGGTGTTACG CGATAAGGGG 
TGA 

 

Protein sequence

MARAGNSLIS HGRVAENRRA RHDYSIEETI EAGLILVGTE VKSLRTGRAN IADSYAGPKS 
GELYLYNAYI PDWTQAVKAF AHEPRQPRKL LVHRREARRL ISAINKDGMT LVPLYLYFND 
RGFAKVQLGL AKGRKAHDKR QAIKEREWNR DKARVLRDKG