Gene Rru_A1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1859 
Symbol 
ID3835283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2157440 
End bp2158084 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID637825958 
Producthypothetical protein 
Protein accessionYP_426946 
Protein GI83593194 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00561567 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTTT ATCCCCAGGA GCGAATCGGC CTGTTCATCG ACGGTTCGAA TCTCTACGCC 
GCCGCCAGGG CGCTGGGTTT CGATATCGAC TATAAGCGCC TGCTTGAGCT CTTCGCCGCC 
AAGGGCCGGC TGATCCGGGC GTTTTATTAT ACCGCCCTGG TGGAGGATCA GGAATATTCC 
CCGATCCGCC CGCTGGTCGA CTGGCTGGAC TATAACGGCT ATACCATGGT CACCAAGCCG 
ACCAAGGAAT TCACCGACGC CACCGGCCGA CGCAAGATCA AAGGCAATAT GGACATCGAA 
TTGGCCATCG ATGTCATGGA AATGGCGCCC CATCTCGACC ATATCGTTCT TTTTTCGGGC 
GATGGCGATT TCCGCCGGCT GGTCGACGCG GTCCAGCGCA AGGGCCTGCG GGTGACCGTG 
GTCAGCACCG TGCGCTCGCA GCCGCCGATG GTCGCCGACG AGTTGCGCCG TCAGGCCGAT 
ACCTTCATCG AACTCCTTGA TCTCGAACCC AGCATCGCCC GGGCGCCCTT GCACCGCGAG 
CCGCCGCCCT CCGCCCTCGC CGCGTCCCAT CATGACGATG ATGACGAGGA CGATGAGGAC 
GACGAGGACG AGGACGACCA GATCGATCAG TATATGCCCA AGTAA
 
Protein sequence
MIFYPQERIG LFIDGSNLYA AARALGFDID YKRLLELFAA KGRLIRAFYY TALVEDQEYS 
PIRPLVDWLD YNGYTMVTKP TKEFTDATGR RKIKGNMDIE LAIDVMEMAP HLDHIVLFSG 
DGDFRRLVDA VQRKGLRVTV VSTVRSQPPM VADELRRQAD TFIELLDLEP SIARAPLHRE 
PPPSALAASH HDDDDEDDED DEDEDDQIDQ YMPK