| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1856 |
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| Symbol | |
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| ID | 3835280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2153978 |
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| End bp | 2156125 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637825955 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_426943 |
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| Protein GI | 83593191 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.709628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGA TGCGCCAGTT CGAACTGGTC GAGCGGGTCA AGGCCTATGA CCCCAACGCC
AACGAGGATC TGCTCAACCG CGCCTACGTC TACGCGATGA AGATGCATGG CTCGCAATTG
CGGGCCTCGG GCGATCCCTA TTTTTCCCAT CCCATTGATG TCGCCGGGAT CCTGACCCGC
TATAAGCTCG ACTGCGCCTC GATCATCACG GCGCTGTTGC ACGACACCAT CGAGGACACC
GAGGCGACGC TGGAGGATGT CCGCCAGCTT TTCGGCAATG ATGTCGCCCG TCTCGTCGAT
GGGGTGACCA AGCTCACCCG TATCCAGATC TCCTCCGACC ACGCCAAGCA GGCCGAGAAT
TTCCGCAAGC TGCTGCTGGC GATGAGCGAG GACATCCGCG TCCTGATGGT CAAGCTGGCC
GACCGCCTGC ACAACATGCG GACGCTGCAT TTCATCCGCA AGCCGGAGAA GCGCGCCCGC
ATCGCCCTTG AGACCATGGA GATCTACGCG CCGCTCGCCG AACGCATCGG CATGGCCGAG
ATCAAGGAGG AACTCGAGGA TCTGGCCTTC CGCGAGCTCT ATCCCGACGC CAAGGAAGGC
ATCGAGGCGC GGCTGACCTT TCTGCGCGAG CAGGGCGGCA CCCTGGTGCC CAAGGTCATC
GATCAGCTCA AGGCCGCTTT GGCCGAGCAC GGACTGACCG CCGAGATCAC CGGGCGCGAA
AAGACGCCCT ATTCGATCTG GCAGAAGATG AAGCGCAAGA ACATCTCGTT CGAGCAGCTG
TCCGACATCA TGGCCTTCCG CATCACCGTT GAAAACCTTG AGCAATGCTA TCAGGCGCTG
GGCATCATCC ACGCCTCCTA TCCGATGATC CCCGACCGCT TCAAGGACTA TATCTCGACG
CCCAAGCGCA ACGGCTATCA GTCGATCCAT ACGGCGGTCA TCGGGCCCGA ACGCCTGCGC
ATCGAAATCC AGATCCGCAC CGCCGAGATG CATTCGGTGG CCGAACTCGG CGTGGCCGCC
CATTGGTCCT ATAAGCAGGG CTCGCCGGTC ATGGATGGCC GGCAATATCG CTGGATCCGC
GAGTTGCTCG AAATTCTCGA GCATACCTCC AGTCCCGAGG AATTCCTTGA GCATACCAAG
CTCGAGATGT TCAGCGATCA GGTGTTCTGC TTCACCCCCA AGGGTGATCT GATCGGCCTG
CCGAGCGGGG CGACGCCGGT CGATTTCGCC TATGCGGTCC ATACCCAGGT CGGCGACCGC
TGCGTCTCGG CCAAGGTCAA TGGCCGGCTG GTGCCCCTGC GCACGCCCCT GCACAACGGC
GATCAGGTGG AGATCGCCAC CTCGAAGGCG CAGACGCCCT CGCCCGAATG GGAACGCTTC
GTCGTTACCG GCAAGGCGCG GGCCCAGATC CGCAAATTCG TGCGCTCGCA GCGCCGCGAC
CAATATCTGA TCCTCGGGCG CCAGTTGCTC GAACGGGCCT TCAAGGCCGA AAACTACGAG
ATGACGGAAA AGGGCCTCGA CGGAGTCCTC AAGAAATTCC GCGCCGATAG CGTCGAAGAT
CTGATCGTCG ATGTCGGCGA GGGCCAGTTG CCGGCCCGCG AGGTCGTGCA GGCGGTCTAT
CCCGGCCTCA AGATGGTTCC CAAGCTGGCC GCCGTCGTCA CCCTGGGGCG GACCAAGAAG
CCGCGGGCCA GCGACGACCA CAGCTTCAAG ATCAAGGGGA TGATCCCCGG CATGGCGTTA
CATTTCGCCA AATGCTGTCA CTCGCTGCCC GGGGACCGCA TCGTCGGCAT CGTCACCACC
GGCAAGGGCA TCACCATTCA CACCATCGAT TGCGACCAGC TCGAGCAGTT TTCCGACGAG
CCCGAGCGCT GGCTTGATCT GGCCTGGGAT GCCGAGGCCG ATAGCCAGGT TCACGTCGGC
CGGGTCAATG TGGTGGTCGC CAATGAACCG GGCAGTCTTG GCGCCCTGAC CACGGTGATT
GCCAAGAACC TGGGGAATAT CACCAATCTC AAGATCACCA ATCGGCAGCA GGATTTCTTC
GACATGATCG TCGATGTCGA GGTCAAGGAT GTCCGTCACC TGACCAACAT CATCGCCGCC
CTGCGCGCCA CATCCGCCAT CAATTACGTC GAGCGCGCGA GGCACTAA
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| Protein sequence | MAMMRQFELV ERVKAYDPNA NEDLLNRAYV YAMKMHGSQL RASGDPYFSH PIDVAGILTR
YKLDCASIIT ALLHDTIEDT EATLEDVRQL FGNDVARLVD GVTKLTRIQI SSDHAKQAEN
FRKLLLAMSE DIRVLMVKLA DRLHNMRTLH FIRKPEKRAR IALETMEIYA PLAERIGMAE
IKEELEDLAF RELYPDAKEG IEARLTFLRE QGGTLVPKVI DQLKAALAEH GLTAEITGRE
KTPYSIWQKM KRKNISFEQL SDIMAFRITV ENLEQCYQAL GIIHASYPMI PDRFKDYIST
PKRNGYQSIH TAVIGPERLR IEIQIRTAEM HSVAELGVAA HWSYKQGSPV MDGRQYRWIR
ELLEILEHTS SPEEFLEHTK LEMFSDQVFC FTPKGDLIGL PSGATPVDFA YAVHTQVGDR
CVSAKVNGRL VPLRTPLHNG DQVEIATSKA QTPSPEWERF VVTGKARAQI RKFVRSQRRD
QYLILGRQLL ERAFKAENYE MTEKGLDGVL KKFRADSVED LIVDVGEGQL PAREVVQAVY
PGLKMVPKLA AVVTLGRTKK PRASDDHSFK IKGMIPGMAL HFAKCCHSLP GDRIVGIVTT
GKGITIHTID CDQLEQFSDE PERWLDLAWD AEADSQVHVG RVNVVVANEP GSLGALTTVI
AKNLGNITNL KITNRQQDFF DMIVDVEVKD VRHLTNIIAA LRATSAINYV ERARH
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