Gene Rru_A1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1823 
Symbol 
ID3835247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2121822 
End bp2122955 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID637825922 
ProductGTP cyclohydrolase II 
Protein accessionYP_426910 
Protein GI83593158 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACG GAACCTCTCC CGTGCCCTAT CGCGATTATC TGGCTTCCCC GGAAGACATC 
ATCGAAGATG CCCGTCAGGG CAAAATGTTC ATCCTGGTCG ATGACGAGAA CCGGGAAAAC
GAAGGCGATC TGGTGATCCC GGCGCAAATG GCGACGGCCG AGGTGGTCAA TTTCATGGCC
AAGCACGGCC GTGGCTTGAT CTGTCTGGCG ATGACCCGCG AGCGCTGCGA GCAGCTTGAT
CTGCCGTTGA TGGCCCAGCA GAACAGCTCG CGCCATTCCA CCGCCTTCAC CATCAGCATC
GAAGCCAAGG ATGGGGTGAC GACGGGGATT TCCGCCGCCG ACCGGGCGCT GACCATCCAG
GTCGCCATCG ATCCGGCCAA GGGGCGGGGC GATATCGCCA CCCCCGGCCA CGTGTTCCCG
CTGGTCGCCC GCGATGGCGG CGTGCTGGTG CGCGCCGGCC ATACGGAAGC CGCCGTTGAT
GTCGCCCGCA TGGCCGGGCT GGTGCCCGCC GGCGTCATCT GTGAGGTGAT GAACGACGAT
GGCACCATGG CCCGCATGCC CGATCTGGTG CGCTTCGCCC AGGAACACGG GCTGAAGGTC
GGCACCATCG CCGATCTGAT CGCCTATCGG CGGACCAAGG AACGGCTGGT GCGCCGCGAG
TTGGAGACCG ATTTCCGCTC GGTTCACGGC GGCGACTGGC GGATGATGCT GTATGTCTCG
ACCGTGTCCT ATGGCGAACA CATCGCCCTG GTCAAGGGCG ATCCGCGCGG CAGCGATCCG
GTTCTGGTGC GCATGCATGC GCTGAACGTG CTCGACGACG TGCTGGGCGA CAGCGACGGC
AATGCCCATG GCCAGCTTCA CCGGGCGATG GACGTGATCG GCCGGGCGGG GCGCGGCGTG
CTGGTGCTGA TCCGCGAGGG TCGGCCGACG GCGCTGTCGG AACGCCTGCG CGCGCGCATC
GAACAGGGGC CGAGCGCCCA GCGTCTGGTC GATTACGGGG TGGGGGCGCA GATCCTGCTT
GATCTTGGCG TGACCGATAT GACGCTTCTG ACCAATACGC CCAAGCATAT CATCGGCCTG
GAGGGCTACG GCCTGCGCGT GGCCGGCCAT CAGCCCCTTT CGGACAAGGA GTGA
 
Protein sequence
MTDGTSPVPY RDYLASPEDI IEDARQGKMF ILVDDENREN EGDLVIPAQM ATAEVVNFMA 
KHGRGLICLA MTRERCEQLD LPLMAQQNSS RHSTAFTISI EAKDGVTTGI SAADRALTIQ
VAIDPAKGRG DIATPGHVFP LVARDGGVLV RAGHTEAAVD VARMAGLVPA GVICEVMNDD
GTMARMPDLV RFAQEHGLKV GTIADLIAYR RTKERLVRRE LETDFRSVHG GDWRMMLYVS
TVSYGEHIAL VKGDPRGSDP VLVRMHALNV LDDVLGDSDG NAHGQLHRAM DVIGRAGRGV
LVLIREGRPT ALSERLRARI EQGPSAQRLV DYGVGAQILL DLGVTDMTLL TNTPKHIIGL
EGYGLRVAGH QPLSDKE