| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1789 |
|---|
| Symbol | |
|---|
| ID | 3835211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2080153 |
|---|
| End bp | 2081199 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825886 |
|---|
| Product | cytochrome-c peroxidase |
|---|
| Protein accession | YP_426876 |
|---|
| Protein GI | 83593124 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTC TTTTAAGGAT CACGGCGGCT TGCGCCCTGA CCCTCGCCGT GGCCGGCCCG
GCCTTCGCCG CCGATGATCT GCGGGCCAAG GCCAAAGAGG TCTTCGAGGT CATCCCGACG
TCGGTTCCCG AAATCAAGGG GAACGCCATC ACCCCGGCCC GCATCGAGCT TGGCCGCAAG
CTTTTCTTCG ATCCGCGCCT GTCGCGCAGC GGCCTCATCT CCTGCAACAC CTGCCACAAC
CTGGGCATGG GCGGGGATGA CAATCTTGAA ACCTCGATCG GCCACGGCTG GCAAAAGGGA
CCGCGCAACG CGCCGACCGT TCTGAACGCC GTGTTCAACA TCGCCCAGTT CTGGGACGGC
CGCGCCGAAG ACCTGCGCAC CCAGGCCAAG GGCCCCGTGC AGGCCGGCGT CGAGATGGCC
AGCACGCCCG AACGCGTCGT CGCCACCTTG AAGTCGATGC CCGAATACGT CGCCGACTTC
AAAGCGGCCT TCCGCGACGA TCCCGATCCG GTCAGCTTCG ACAACATGGC CAAGGCGATC
GAGATCTACG AAGCCACGCT GATCACCCCC GACAGCAAGT TCGACAAATG GCTCGCCGGC
GACGACGCCA GCATGACCAA GCTGGAAACC GCCGGGCTGT CGCTGTTCCT CGATAAGGGC
TGCGCGGCCT GTCACAACGG CGTCAACATT GGCGGCAACG GCTATTATCC GTTCGGCGTG
GTCGAACAGC CGGGCGCCGA TATCCTGCCC GTCGCCGACA AGGGCCGCTT CGCCGTGACC
AAGACGGCCA CCGAGGAATA TGTCTTCCGC GCCGGCCCCT TGCGCAACAT CGCCCTCACC
GCCCCCTACT TCCATTCGGG CAAGGTGTGG GATCTCGAGC AGGCGGTGGC GGTGATGGGA
TCGTCCCAGC TTGGCGAAAC CCTGAGCGAG TCCGACGTGA AGGCGATCAC CGCCTTCCTG
ACCACCCTCA CCGGCGTCAT GCCCAAGGTG GAGTATCCGA TCCTGCCCGT CAGCACCCGC
GAAACGCCCA AGCCCGAAGG CATGTAA
|
|---|
| Protein sequence | MQRLLRITAA CALTLAVAGP AFAADDLRAK AKEVFEVIPT SVPEIKGNAI TPARIELGRK
LFFDPRLSRS GLISCNTCHN LGMGGDDNLE TSIGHGWQKG PRNAPTVLNA VFNIAQFWDG
RAEDLRTQAK GPVQAGVEMA STPERVVATL KSMPEYVADF KAAFRDDPDP VSFDNMAKAI
EIYEATLITP DSKFDKWLAG DDASMTKLET AGLSLFLDKG CAACHNGVNI GGNGYYPFGV
VEQPGADILP VADKGRFAVT KTATEEYVFR AGPLRNIALT APYFHSGKVW DLEQAVAVMG
SSQLGETLSE SDVKAITAFL TTLTGVMPKV EYPILPVSTR ETPKPEGM
|
|---|
| |