Gene Rru_A1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1784 
Symbol 
ID3835206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2075264 
End bp2076064 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID637825881 
Productexodeoxyribonuclease III 
Protein accessionYP_426871 
Protein GI83593119 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.144543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGTA TCGCCACCTT CAACGTCAAC AGCGTCAAGG CCCGCCTGCC CAACCTGCTC 
GACTGGCTGG GAACACGCTC TCCCGACGTC GCCTTGCTCC AGGAGATCAA ATGCCTGGAC
GAGGCCTTTC CCCGCGCCGA GATCGAGGCC CTGGGCTACC GACTCGCCGT CCATGGCCAG
AAAGCCTATA ATGGCGTGGC CATTCTGTCG CGCCTGCCGC TGAGCGAGGT CACCGCCCGC
CTGCCGGGAC TCGATGGCGC CCCGGCCGAG GACGATGATC AGGCCCGCTA CCTGGAAGCC
GTGGTCGATG GCCGCTTCCG GGTCTGCTGC CTGTATCTGC CCAATGGCAA TCCGGTCGAG
GAGGACCGCA AGTTCGGCTA CAAGCTGGCC TGGATGGATC GGCTGATCGT CCGCGCGACA
CATCTTATGC GCGACTTCCC CGATACACCC GTTATACTCG GGGGCGATTT CAACGTCTGT
CCGGACGATC TCGACGTTTA TGACCCCGCC GGCTGGGCCA ATGACGCCCT GTGCCGCCCG
GAAACCCGGC AACGCTTCCG CGCCCTTGTC TTCCTTGGCT ATACCGATGC CCTGCGCGCC
CTGAACCCCG GGGCGCCGCT TTTCACCTTT TGGGATTATC AAGCCGGCGC TTGGCAAAAG
GATCACGGCC TGCGCATCGA TCATCTGCTG CTTAATCCGG CAGCGGCGGA CCGTTTGAGC
GCCGCTGGCG TCGATCGCGC CACCCGCGGA CACGCTAAGT CGAGCGATCA TGCACCGTCT
TGGGTGACGC TCGAGCTATA A
 
Protein sequence
MVSIATFNVN SVKARLPNLL DWLGTRSPDV ALLQEIKCLD EAFPRAEIEA LGYRLAVHGQ 
KAYNGVAILS RLPLSEVTAR LPGLDGAPAE DDDQARYLEA VVDGRFRVCC LYLPNGNPVE
EDRKFGYKLA WMDRLIVRAT HLMRDFPDTP VILGGDFNVC PDDLDVYDPA GWANDALCRP
ETRQRFRALV FLGYTDALRA LNPGAPLFTF WDYQAGAWQK DHGLRIDHLL LNPAAADRLS
AAGVDRATRG HAKSSDHAPS WVTLEL