Gene Rru_A1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1776 
Symbol 
ID3835198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2067306 
End bp2067992 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID637825873 
Productpeptidase M50 
Protein accessionYP_426863 
Protein GI83593111 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00724949 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGACA TGATCTTTGG CATTCTGACC TGGCTTCCCG GGCTGATCCT GGCCATCACC 
CTGCACGAGG CGGCGCATGG CTATGTCGCC TCGGCTTTGG GCGACCAGAC GGCGCGGCTG 
CTGGGGCGGG TGACGCTCAA TCCCATCCGC CATGTCGATC CCTTCGGCAC CCTGGTGCTG 
CCGGGGCTGC TGTTTCTGGT CGGCGCCCCC TTCCTGTTCG GCTGGGCCAA GCCGGTTCCC 
GTCGATTATC GCAATCTGCG CCACCCTAAG CGCGATATGG CCTGGGTGGC GCTGGCCGGC 
CCGGGGATGA ATATCTTCCT GGCGGTGGTT TCCGCCGCCG CCTTGCATGG GGCGTTGCTG 
CTGCCCGATC CGGCCGCCGA CTGGCTGATC ACCACCTTGC AGAAATCGGT GCTGATCAAC 
TGCGTGCTGG CGGTGTTCAA CATGATCCCG GTGCCGCCCT TGGATGGCGG CCGGGTGCTG 
GTCGGCATCT TGCCGATGCG GGCGGCGGTG GTGGTCGCCC GCATGGAACG GGTGGGGATG 
CTGGCGCTGA TCGGGGTGAT CTTCCTGCTT CCCCTGGCCT TGAGCCAGTT CGGGGTGGAT 
TTCGATCCGT TCTCGCGGAT CATCGGCCCG GTGGTGCGCG CCCTGCTGGG CGCCGTCTAC 
ACCACGGCCG GCATCCCGCT GTTCTGA
 
Protein sequence
MGDMIFGILT WLPGLILAIT LHEAAHGYVA SALGDQTARL LGRVTLNPIR HVDPFGTLVL 
PGLLFLVGAP FLFGWAKPVP VDYRNLRHPK RDMAWVALAG PGMNIFLAVV SAAALHGALL 
LPDPAADWLI TTLQKSVLIN CVLAVFNMIP VPPLDGGRVL VGILPMRAAV VVARMERVGM 
LALIGVIFLL PLALSQFGVD FDPFSRIIGP VVRALLGAVY TTAGIPLF