Gene Rru_A1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1730 
Symbol 
ID3835151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2025767 
End bp2026294 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content68% 
IMG OID637825826 
Productnuclease 
Protein accessionYP_426817 
Protein GI83593065 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0510494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCAT GGCGACTGGG CGGACGGACT CTGGGCCTGC TGGGAGGGGT CATTTTATTG 
GCGAGCCTGC CGGCGACGGC GCGGGCGGAC GTGATCGGCG AGGCCTGCGT CATCGATGCC 
GGGCATCTGA CCATCGGCGG CAAAAGGGCC TATGGCCGCT GTCAGGGGGG AACGGCGATC 
ACCCTGGCGG CGATCGACGC GCCCAGTTCG GCGCAGACCT GCACGACGCC GGCGGGAAAA 
CCCTGGGATT GCGGGCGTTG GGCGGCCTAT GTCCTGGTCG AGCTTTCCAA GAACAAGAAG 
GTTATCTGCC AAGGGACGGA AAAAGACGAC AAAGGGGGGC TGGTGGCCCT GTGCTACGCC 
GGCGGGCGGC AGATCAACCG CACCCTGGTC GAATTGGGCT GGGCCTTGCC AGCGACTACG 
GATCCCAGCT TCGCGGCGGC CGTGGCCAAG GCCCGTTCGG CCGCCGTCGG CCTGTGGCAG 
GGCACCTTCG ATCCCCCGGC CGAATGGCGC GCCCGTCACA AGCCGTGA
 
Protein sequence
MAAWRLGGRT LGLLGGVILL ASLPATARAD VIGEACVIDA GHLTIGGKRA YGRCQGGTAI 
TLAAIDAPSS AQTCTTPAGK PWDCGRWAAY VLVELSKNKK VICQGTEKDD KGGLVALCYA 
GGRQINRTLV ELGWALPATT DPSFAAAVAK ARSAAVGLWQ GTFDPPAEWR ARHKP