| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1684 |
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| Symbol | hfq |
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| ID | 3835104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1976387 |
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| End bp | 1976638 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637825779 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_426771 |
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| Protein GI | 83593019 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGCCG AAAAGACTCA AAATGTTCAG GATGTCTTTC TGAACTATAT TCGCAAAAAC
AAGGCTCCGG TTACGATCTT TCTGGTGAAT GGTGTTAAGC TTCAGGGAAT CGTGACGTGG
TTTGATAATT TTTCGTTGTT GCTGCGTCGC GATGGACATA CGCAGCTTGT TTATAAGCAT
GCCATTTCGA CGATCATGCC GGCGTCGCCG GTGCAACTGT TCGAACCCAC CAAGGAAGAA
GTCGAGGCCT GA
|
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| Protein sequence | MPAEKTQNVQ DVFLNYIRKN KAPVTIFLVN GVKLQGIVTW FDNFSLLLRR DGHTQLVYKH
AISTIMPASP VQLFEPTKEE VEA
|
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