| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1578 |
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| Symbol | |
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| ID | 3834995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1858803 |
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| End bp | 1860056 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637825670 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_426665 |
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| Protein GI | 83592913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0665062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTTCA ACGCCTTTGA ACGGATGATG GCCGGCCGCT ACCTGCGGGC CCGGCGCAAG
GAAGGCTTCG TTTCGGTGAT CGCCGGATTT TCCCTGGCCG GCATCGGCCT GGGGGTGGCG
ACGCTGATCA TCGTCATGGC GGTGATGAAC GGCTTCCGCG AGGATCTGAT GGGCCGGATC
TTCGGCCTGA ACGGCCATCT CACCGTTCTT GGGCAATACG ACGTGATGAT GGATTACGAC
CGCGCCACCG ATATCATTCG CGGCATTCCC GGGGTGCGGG CGGTGACGCC GACGGTTGAA
GGGCAGGTGA TGCTGACCGA CAACGGCCGC TCGGTCGGCG GGCTGGTGCG CGGCGTGCGC
CCCGAAGACC TGCGCCAGCG GCCGATGCTG GCCAATGCGG TGATCGCCGG CTCGCTCGAT
GATCTGCGCG GCCAGGATTC GATCATGATC GGCAATCGTC TGGCCGAGAA TTTCGGGCTG
CGGGTTGGCG ACAAGCTGAC CCTGGTTTCG CCCAAGGGCA AGGTGACGGC CATGGGCACC
GTGCCCCGGG TGCGCGCCTA TACGGTGCGC GTTATCTTTT CCATCGGCAT GAGCGAATAC
GACAGCAGCT TCGTCTTCCT GCCCCTTGAG GCCGCCCAAA CCTATTTCCA GGTGCCGACC
GAAGGCGTCA ACCATCTGGA GGTGGTGGTC GACCATCCCG ACCGGGTGGG CGAGGTGGCG
GGCACCATCG CCTCGACCAA TGGCCTGGGC GGCATCCGCC TGCGCGACTG GCGCCAGACC
AACGCCACCT TCTTCAATGC GCTGCAGGTC GAGCGCAACG TGATGTTCCT GATCCTGACC
CTGATCATCG TCGTCGCCGC CTTCAATATC ATCAGCGGCC TGATCATGCT GGTGAAGGAC
AAGGGCCGCG ATATCGCCAT CTTGCGCACC ATGGGCGCCT CGCGCGGGGC GATCATGCGC
ATCTTCTTCC TGGCCGGCGC CGCCGTCGGC GTGACCGGCA CCCTGGCCGG CCTGCTGCTT
GGCGTGCTGT TTTGCCAGAA CATCGAAGCC ATTCGTCAGG GCCTGCAAAG CCTGCTTGGC
GTCGAATTGT TCAATGCCGA GATCTATTTC CTGGCGACGA TGCCAGCGAC CATGGACCCC
CATGAGGTGA TGAACGTCGT GCTGATGGCT TTGGGCCTGT CGTTCGCCGC CACCCTCTAT
CCAGCATGGC GGGCGGCGCG CACCGATCCC GTGGAGGCCC TGCGCAATGA GTAA
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| Protein sequence | MIFNAFERMM AGRYLRARRK EGFVSVIAGF SLAGIGLGVA TLIIVMAVMN GFREDLMGRI
FGLNGHLTVL GQYDVMMDYD RATDIIRGIP GVRAVTPTVE GQVMLTDNGR SVGGLVRGVR
PEDLRQRPML ANAVIAGSLD DLRGQDSIMI GNRLAENFGL RVGDKLTLVS PKGKVTAMGT
VPRVRAYTVR VIFSIGMSEY DSSFVFLPLE AAQTYFQVPT EGVNHLEVVV DHPDRVGEVA
GTIASTNGLG GIRLRDWRQT NATFFNALQV ERNVMFLILT LIIVVAAFNI ISGLIMLVKD
KGRDIAILRT MGASRGAIMR IFFLAGAAVG VTGTLAGLLL GVLFCQNIEA IRQGLQSLLG
VELFNAEIYF LATMPATMDP HEVMNVVLMA LGLSFAATLY PAWRAARTDP VEALRNE
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