Gene Rru_A1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1563 
Symbol 
ID3834980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1844002 
End bp1844490 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID637825655 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_426650 
Protein GI83592898 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.339949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCA TCGTCCGCAC GCTCCGCTCC CTGACGCTCT GGGAGCTGGT CTCCGGCATG 
GCCTTGACCT TCCGCTACAT GTTGAAGCCG AAGGTGACCA TCAATTACCC CTTCGAAAAG
GGCTATCTGT CGCCGCGGTT TCGCGGCGAG CATGCCCTGC GGCGCTATGC CAATGGCGAG
GAACGCTGTA TCGCCTGCAA GCTGTGCGAG GCGATCTGCC CGGCCCAGGC GATCACCATC
GAAGCCGAAC CGCGCACGGA TGGCAGCCGG CGGACCACCC GCTATGACAT CGACATGACC
AAATGCATCT ACTGCGGCTT CTGCGAGGAG GCCTGTCCGG TCGATGCCAT CGTCGAGGGA
CCGAATTTCG AGTTCGCGGC GGAAACCCGC GAGGAACTTC TGTACAACAA GGCGAAGTTG
CTGGCGAACG GCGATCGCTG GGAGCCCGAA CTGGCCTTGC GCCTGCGCAA GGACGCCGCC
TACCGCTGA
 
Protein sequence
MTSIVRTLRS LTLWELVSGM ALTFRYMLKP KVTINYPFEK GYLSPRFRGE HALRRYANGE 
ERCIACKLCE AICPAQAITI EAEPRTDGSR RTTRYDIDMT KCIYCGFCEE ACPVDAIVEG
PNFEFAAETR EELLYNKAKL LANGDRWEPE LALRLRKDAA YR