Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1562 |
Symbol | |
ID | 3834979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1842969 |
End bp | 1843982 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637825654 |
Product | respiratory-chain NADH dehydrogenase, subunit 1 |
Protein accession | YP_426649 |
Protein GI | 83592897 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACT TCTGGGGGGG CTATCTCTGG CCCGCGATCA TCATCGTTCT GCAGTGTCTG GCCATCATCT TGCCGATGCT GGGCGCCATC GCCTATTTGA CCTATGCCGA GCGCAAGGTC ATCGGCGCCA TGCAAATGCG CAAGGGGCCC AATGTCGTCG GCCCCTTCGG CCTGCTCCAG CCGCTGGCCG ATGGCGTCAA GCTGTTCCTC AAGGAAACCA TCATCCCCAC CGGGGCCAAC CGCGCGGTGT TCATCATCGC GCCGCTGATG ACCTTCATTC TGGCTTTGAT CGCCTGGGCG GTGATCCCGT TCGACGCCGG CTGGGTGGTC GCCGATATCA ATGTCGGCGT GCTCTACCTG TTCGCCGTCT CGGGGCTGGG CGTCTATGGC ATCATCATGG CCGGCTGGGC GTCGAACTCG AAATACGCCT TCTTGGGCGG TCTGCGCTCG GCGGCGCAGA TGGTGTCTTA TGAAGTGGCG ATGGGGCTGA TCATCATCGC CGTCATCTTG TCGGCGGGAT CGATGAACCT GTCCGATATC GTCGAGGCCC AGCGCCAGGG GGTGTGGTAC TTCATTCCCC ACTTCCCGAT GTTCGTGATG TTCCTGGTGT CGATCCTGGC CGAGACCAAC CGCGCCCCCT TCGACCTTCC CGAAGCGGAA GCCGAACTGG TTTCGGGCTA TAACGTCGAA TATTCGGCCA TGCCCTTCGC CCTGTTCTTC CTGGGCGAAT ACGGCAACAT GATCCTGATG AGCGGCATCA CCGCCATCTT GTTCCTGGGT GGCTGGTTGC CGCCGGTCGA TATCGCGCCG TTCAACTGGA TCCCGGGGAT TATCTGGTTC TTCCTCAAGA TCGCCCTGAT CCTGTTCGTC TTCCTGTGGG TTCGCGCCAC CTTCCCGCGC TACCGCTACG ATCAGCTGAT GCGCCTGGGG TGGAAGGTCT TCCTGCCCGG TTCGTTGATC TGGGTGGTGC TGACGGCCGG GTTCCTGGTC ACTTTCGACA TGCTTCCCCG GTAA
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Protein sequence | MADFWGGYLW PAIIIVLQCL AIILPMLGAI AYLTYAERKV IGAMQMRKGP NVVGPFGLLQ PLADGVKLFL KETIIPTGAN RAVFIIAPLM TFILALIAWA VIPFDAGWVV ADINVGVLYL FAVSGLGVYG IIMAGWASNS KYAFLGGLRS AAQMVSYEVA MGLIIIAVIL SAGSMNLSDI VEAQRQGVWY FIPHFPMFVM FLVSILAETN RAPFDLPEAE AELVSGYNVE YSAMPFALFF LGEYGNMILM SGITAILFLG GWLPPVDIAP FNWIPGIIWF FLKIALILFV FLWVRATFPR YRYDQLMRLG WKVFLPGSLI WVVLTAGFLV TFDMLPR
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