Gene Rru_A1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1411 
Symbol 
ID3834826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1668777 
End bp1669448 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID637825501 
Producthypothetical protein 
Protein accessionYP_426499 
Protein GI83592747 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00806317 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACA CCGCCCGCGC CGCCATCCTG GCCCGCCTGC GCGCCGCCCC GCGATCCCCC 
GCCCCGGCCT ATCCGCGCCC CGGAACGCCG GCCTGGGCGC CCCCCGTCCA TGGCAGCGAA 
CGGCTGGCCC GCTTCACCGC CCTGCTCGAA GCCGCCCATG CCGAGGTTTA TCAGGCCAGC 
GCCACCGACT GGCCCGCCCG TCTGGCCGAG TTGCTGGAGC AAAAGGCCGT CGCACGGCTG 
CTCTATGCGC CGACGACGCC GGCCGGGCGC CAGTTGGCCC AGGCCTGGGG CGAGGCCACG 
GACGGGCGGC CCCGCCTGAT CGCCTATGAC CGCCCGGTCG AAGCGATGAA GGAAACGCTG 
GTATCCGGGG TCGAAGCCGC CCTGACCGGT ACCCTGGGGG GCATCGCCCA TACGGGATCG 
CTGGTGCTGT GGCCGACCCC CGACGAACCC CGGCTGATGA GCCTGCTGCC ACCCCTGCAT 
ATCGCCCTGG TCGAGGAGAC GGCGATCGCC GACAGCCTGT CGGCGCTGAT CGCCAGCCAG 
CATTGGGCCA AGGCGATGCC GACCAACGCC CTGCTGATCT CCGGCCCGTC GAAAACCGCC 
GATATCGAAC AGACCCTGGC CTATGGCGTC CACGGCCCCA AGGCCCTGAT TGTCCTGGTG 
ATCCGCCCAT GA
 
Protein sequence
MNDTARAAIL ARLRAAPRSP APAYPRPGTP AWAPPVHGSE RLARFTALLE AAHAEVYQAS 
ATDWPARLAE LLEQKAVARL LYAPTTPAGR QLAQAWGEAT DGRPRLIAYD RPVEAMKETL 
VSGVEAALTG TLGGIAHTGS LVLWPTPDEP RLMSLLPPLH IALVEETAIA DSLSALIASQ 
HWAKAMPTNA LLISGPSKTA DIEQTLAYGV HGPKALIVLV IRP