| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1388 |
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| Symbol | |
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| ID | 3834803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1639371 |
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| End bp | 1640972 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637825478 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_426476 |
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| Protein GI | 83592724 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATGG ACTATACCTA TGCGATTGAT CTCGACGATT TCGTCGATGA TTCCACCGAC
TGCAAGACCG GCGAATGTCG TGTCGCCGTT CTGCCGATCC TGTTCCAGAT CAGCCAGATC
ATTTCCGAGA GCGAGGATTT GCCCCGGTCT CTGGCGATCA TTCTCAAGGT CATGCAGCAG
CGCATGCGCA TCGGCCGCGG AACCGTCAGT CTTTATGACC GCGAAAGCGG CAAGATCTTC
GTTCACGAAA GCTTTGGCGG CCGGGACGAC CAGCAGGCCC TGGGCGCCAG CGGGCCGGGG
CGCGGCATCA CCGCCAAGGT GGTGGACTCG GGCAAGGCGA TCATCGTGCC CGAACTGCGC
GACAGCCCGA CCAAGCCCAA CCGCACCCAG CTTCAGGCCG ATGGCAGCGA TTTGGCGGTG
TCGTTCTTCT GCGTGCCGAT CCTGCGCGGT CGCAAGGTTC TGGGCACCAT CAGCGCCGAG
CGCGTCTATG CCAATCGCCG GCTGTTGAAG CAGGACGTGG AACTGATCGC CACCATCGCC
TCGATGATCG CCCCGGCGGT GGAGCTGTAT CTTTTGGAGA ACATCGACAA GGTGCGGCTG
GAAAACGAGA ATCGCCGTCT GCACGACGCC CTGAAAAGCC GCTTCAAACC TACCAATATC
ATCGGCACCT CCAAGCCGAT GCAAGAGGTC TATGATCTGA TCCACAAGGT GGCGATGACC
AAGGCCACCG TGCTGATCCT CGGGGAAAGC GGCGTCGGCA AGGAATTGGT CGCCAGCGCC
ATCCATTACA ACGGCGCCAC CGCCGAAGGG CCGTTCATCA AGTTCAATTG CGCCGCCTTG
CCCGAAAGCC TAGGCGAGTC CGAGTTGTTC GGTCACGAGA AAGGCGCCTT CACCGGCGCC
ATCGCCCAGC GCAAGGGGCG CTTCGAGATG GCCGACGGCG GCACCATCTT TCTCGACGAG
GTTGGCGAGC TGAGTTTGGC CATGCAGGCC AAGCTGTTGC GGGTGCTCCA GGAAAAGACC
TTCGAGCGCG TCGGCGGCGG CCGGTCGGTG CGCGTCGACG TGCGGATCAT CGCCGCCACC
AACCGCAATC TGCCCGAGAT GGTCGAGAAG GGCACCTTCC GCGAGGATCT GTTCTACCGG
CTCAATGTCT TCCCCATCAC CTTGCCGCCG CTGCGCGACC GGGGCAGCGA CGTGATCTTG
CTGGTCGATC ATTTCATCGC CCGCCACGCC GCCGAGGGTG GGCGCGAGGC CAAACGGGTG
TCGACCCCGG CCTTGACCAT GCTGATGGCC TATCACTGGC CGGGCAATGT GCGCGAACTG
GAAAACGTTA TCGAACGCTC GGTGATCTTG TCGGAAGACG GGGTGATCCA CGGCTATAAT
CTGCCGCCCT CGCTGCAGAC GGCAACGGAG ACCGGCACGT CGTTTGGCTG CGGCCTGGAA
GCCAAGCTGC AGGCGGTGGA ATACGAAATG ATCGTCGAGG CCCTGAAAAC CCATGGCGGC
AACGCCACCG AGGCGGCCAA GGAGTTGGGG CTGACCCGGC GCATCCTTGG CCTGCGCATG
GAAAAATACG CCCTCAATTA CAAGACTTAT CGCAAGCGCT GA
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| Protein sequence | MLMDYTYAID LDDFVDDSTD CKTGECRVAV LPILFQISQI ISESEDLPRS LAIILKVMQQ
RMRIGRGTVS LYDRESGKIF VHESFGGRDD QQALGASGPG RGITAKVVDS GKAIIVPELR
DSPTKPNRTQ LQADGSDLAV SFFCVPILRG RKVLGTISAE RVYANRRLLK QDVELIATIA
SMIAPAVELY LLENIDKVRL ENENRRLHDA LKSRFKPTNI IGTSKPMQEV YDLIHKVAMT
KATVLILGES GVGKELVASA IHYNGATAEG PFIKFNCAAL PESLGESELF GHEKGAFTGA
IAQRKGRFEM ADGGTIFLDE VGELSLAMQA KLLRVLQEKT FERVGGGRSV RVDVRIIAAT
NRNLPEMVEK GTFREDLFYR LNVFPITLPP LRDRGSDVIL LVDHFIARHA AEGGREAKRV
STPALTMLMA YHWPGNVREL ENVIERSVIL SEDGVIHGYN LPPSLQTATE TGTSFGCGLE
AKLQAVEYEM IVEALKTHGG NATEAAKELG LTRRILGLRM EKYALNYKTY RKR
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