Gene Rru_A1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1330 
Symbol 
ID3834745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1567199 
End bp1567972 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID637825420 
Productmalonate/sodium symporter MadM subunit 
Protein accessionYP_426418 
Protein GI83592666 
COG category 
COG ID 
TIGRFAM ID[TIGR00808] malonate transporter, MadM subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGTT TCGTTGAAAT CTTTACGAAG TCTTTGGCCG AATACCCGCT GATCACCGCC 
TTCGTCTTCG TCGGCGCCGC GATGTGGCTG TCCTATGCCG CCTCGAAGAA GCTGACGGCC
GGTCGTGTTC ATGGCTCGGC GATCGCCATC GTTCTCGGCC TGGTGCTGGC CTATATCGGT
GGTAAGTACA CCGGTGGCAA GAAGGGCATC GCCGACGTTC AGATGCTTTC GGGTATCGCC
CTGATGGGCG GCGCCGTGCT GCGCGACTTC GCCATCGTCT CGACGGCGTT TGGCGTGCGT
CTGGAAGAGC TGAAGAAGGT TGGCGTTCCC GGGGCCGTCG CCCTGGTGGT GTCGGTGGTG
GTGGCGATCG CCATCGGTGC CGCGACCTCT TACGCCTTCG GCTATACCGA TCCGGTCAGC
ATGGCCACGA TCGGCGGCGG CGCCGCGACG TTCATCGTCG GTCCCGTCAC CGGCGCCGCC
TTGGGCGCGT CGTCTGAAGT GATCGCCCTG TCGATCGCAG CCGGCGTGGT CAAGTCGATC
GCCGTTATGA TCCTGACGCC GCTTGTCGCC AAGCGCGTCG GCCTGACCAC CCCGGGTGCT
GCCGCCGTTT ACGGCGGAAT CATGGGAACC ACCAGTGGAA CCGCCGCTGG ATTGGCTGCA
ACCGATCCGA AGCTTGTTCC CTATGGCGCC CTGACGGCCA CCTTCTACAC CGGCTTTGGC
TGCTTGGTGT GCCCGTCGAT TGGTTATCTC GTTCTGAACG CGATGTTTGG CTGA
 
Protein sequence
MSGFVEIFTK SLAEYPLITA FVFVGAAMWL SYAASKKLTA GRVHGSAIAI VLGLVLAYIG 
GKYTGGKKGI ADVQMLSGIA LMGGAVLRDF AIVSTAFGVR LEELKKVGVP GAVALVVSVV
VAIAIGAATS YAFGYTDPVS MATIGGGAAT FIVGPVTGAA LGASSEVIAL SIAAGVVKSI
AVMILTPLVA KRVGLTTPGA AAVYGGIMGT TSGTAAGLAA TDPKLVPYGA LTATFYTGFG
CLVCPSIGYL VLNAMFG