| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1268 |
|---|
| Symbol | |
|---|
| ID | 3833576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1489540 |
|---|
| End bp | 1490187 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637825358 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_426356 |
|---|
| Protein GI | 83592604 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTC CCAAGGCCAT CGCCTGGGAT ATCGACGGAA CCCTGATCGA TAGCGAACCC
ACCCACCTGC GTGCCCTGAT AACCGTTTCC GCCGCCCATG GGGTCGATCT GACCTCGGGC
CCCGAGGATC GCTTCCTGGG CGTGCATATG GCCGATGTCT GGACGCTTTT GCGCCCCCGC
TATACCGGGG GGCTGACTTA CGAGCGGTGG CTGGCCGAGA TCATCGCCTG TTATGGTGAC
GACCGCGCCA CCTTGGCGCC GATGCCGGGC GCGCTCGATA CCGTGGCCGC CTTCGCCGCC
GCCGGCATTC CCCAGGCCTG CGTGTCGAAT TCCCTGCGCG AGATCGTCGA CGCCAATCTG
GCCGTTCTCG GCATCGCCCC GCAGCTCGCC TTTTCGCTGT CGTTTGAGGA CGTGCCGGCG
GGCAAGCCCG ATCCCGCCCC CTATCGGCTG GCCGCCCGGC GTTTCGGCGT CGATCCCGCT
AGCGTCTGGG CGATCGAAGA CAGCCTGACC GGCGCCCGCT CGGCCCTGGA TGCCGGGCTG
ACCCTGTTCC TGCTCGGCGA CCACCCCGGC CGCCCCATCC CCCCGGGCGC CATCCGCATC
TCCTCGGTCA GCGAGGTGCT GACGGCCTTT CAGAAGCTGG CGGCTTAA
|
|---|
| Protein sequence | MTPPKAIAWD IDGTLIDSEP THLRALITVS AAHGVDLTSG PEDRFLGVHM ADVWTLLRPR
YTGGLTYERW LAEIIACYGD DRATLAPMPG ALDTVAAFAA AGIPQACVSN SLREIVDANL
AVLGIAPQLA FSLSFEDVPA GKPDPAPYRL AARRFGVDPA SVWAIEDSLT GARSALDAGL
TLFLLGDHPG RPIPPGAIRI SSVSEVLTAF QKLAA
|
|---|
| |