Gene Rru_A1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1235 
Symbol 
ID3833733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1459019 
End bp1459477 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID637825324 
Producthypothetical protein 
Protein accessionYP_426323 
Protein GI83592571 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC TCGTGGCGGC CGTCGGCCGC TGGCGTGGAG GGCCCGAACG GGCCCTCTTC 
GACCATTATG TCGGCCGGCT CAAGGGCGGT CTGGCGGTGA TCGAGGTTGA GGAACGCCGC 
CCGCTGCCCG TCGCCGAACG CAAGGCCCGC GAAGCCGAGC TGCTGCTGGC CCAGCTTCCC 
CCCGGCGCCT TTGTGGTGGC GCTGGACGAA CATGGCGAGG CCTGGGGCAG CGAGCGTCTG 
GCCCGGGAGC TTGACCAACG CCGCCTGGAG GCCCGACCGG CCGCGGTTTT CGCCATCGGC 
GGCGCCGACG GCCATGGCGA GGCCCTGCTG GCCCGGGCCG ATCGCAAGCT GGCCCTGGGG 
GTGATGACCT GGCCGCACAT GCTGGTGCGC GGGCTGATCG CCGAGCAGCT TTACCGCGCC 
CAATGCATTT CGGGTGGACA CCCTTACCAT CGAAGCTGA
 
Protein sequence
MKLLVAAVGR WRGGPERALF DHYVGRLKGG LAVIEVEERR PLPVAERKAR EAELLLAQLP 
PGAFVVALDE HGEAWGSERL ARELDQRRLE ARPAAVFAIG GADGHGEALL ARADRKLALG 
VMTWPHMLVR GLIAEQLYRA QCISGGHPYH RS