| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1234 |
|---|
| Symbol | |
|---|
| ID | 3833732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 1457294 |
|---|
| End bp | 1458865 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637825323 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_426322 |
|---|
| Protein GI | 83592570 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.774717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCC AGATGCCACC GTTCCGACGC CCCCGTCCGG TCGTGCTTTG CATCCTTGAC
GGCTGGGGTC ACCGCGATGA TCCGACCGAT AACGCCATCG CCCTGGCCAA TACCCCGACC
TGGGATCGCC TGATGGCCAC CTGCCCCCAT TCCCTGATCG CCACCAGCGG CGCCGATGTC
GGCCTGCCCG CTGGTCAAAT GGGCAATTCC GAGGTCGGCC ATATGAACAT CGGCGCCGGC
CGGGTGGTGA TGCAGGATCT GCCGCGCATC GACGCCGCCC TCGCCGACGG CTCGGTCGCC
CATTTCCCCG CCCTCGTGCG CTTCATCGAC GCCCTGCGCG CCAGCGGCGG CACCGCCCAT
CTGCTGGGGC TGCTCTCGCC CGGTGGAGTC CATTCCCACC AGGACCATAT CGCCAAGCTG
GCCCGCGTCA TCGCCGCCGC CGGGGTGCCG GTGAAGATCC ACGCCTTCCT CGACGGCCGC
GACACGCCGC CGCGCTCGGC GCTGGGGTTC CTTGAAACCT TCGCCGCCGC CGCCGGACCC
GAGGCGCCGA TCGCCACCGT TTCGGGCCGC TATTACGCCA TGGACCGCGA CAAGCGCTTT
GACCGGGTGC GTCTGGCCTA TGACGTGCTT GTCAGCGGCA AGGGCGAAAG CGCCGCCGAT
GCCGCCAGCG CGGTTTCCCA GTTCTACGAC TCGAAGGACA AGGGCGACGA ATTCGTTCTG
CCCACCGCCA TCGCCGGCTA TGACGGGATG AAGGATGGCG ATGGCGTGTT CATGGTCAAT
TACCGCTCCG ACCGCGCCCG CGAGATCACC CAGGCCCTGC TCGACCCCAC GTTCGATGGC
TTTGAGCGCC AGCCGCCCCA TTTCGCCGGC GCCTTGGCGA TGACCGAGTA TTCCACCGCC
CATAACGCCT TCATGGATGT GCTGTTCGGC CCCGAAAGCC TGAATAACAT CCTGGGGCAA
GTGGTGTCGG AAGCCGGGAT GACCCAGTTG CGCATCGCCG AGACCGAGAA ATACGCCCAC
GTCACCTTCT TCTTCAACGG CGGCCGGGAA ACCAGTTTCC CGGGCGAGGA ACGCATCCTG
ATTCCCAGCC CCAAGGTCGC CACCTATGAC CTTCAGCCCG AAATGTCGGC CCCCGAACTG
ACCGACCGTC TGGTCGAGGT CATCGACGCC GGGCGCTTCG ATGTCATCAT CGTCAATTAC
GCCAATGGCG ATATGGTCGG CCATTCGGGC ATCCTGGAAG CGGCGATCAA GGCGGTCGAG
GCCGTCGATG GCTGCCTGGG CCGGGTCGAA GAGGCGGTGG TGCGGGCCGG GGGCACCATG
CTGGTCACCG CCGACCACGG CAATGCCGAG CTGATGCGCG ATCCGGTGAC CGGCGAGCCC
CACACCGCCC ATACCACCGG CCGCGTCGAT CTGCTGCTGG TCAACGGTCC CGAGGGCGCC
AGCCTCGCCG ATGGCCGGCT GGCCGATCTG TCGCCGACCC TGCTCGCCCT GATCGGCCTG
CCCCAGCCCG CCGAGATGAC CGGCAAGACG CTGGTCGCCA AGGCCGCGGT GGCCGTCGGT
GCGTCGCACT GA
|
|---|
| Protein sequence | MTSQMPPFRR PRPVVLCILD GWGHRDDPTD NAIALANTPT WDRLMATCPH SLIATSGADV
GLPAGQMGNS EVGHMNIGAG RVVMQDLPRI DAALADGSVA HFPALVRFID ALRASGGTAH
LLGLLSPGGV HSHQDHIAKL ARVIAAAGVP VKIHAFLDGR DTPPRSALGF LETFAAAAGP
EAPIATVSGR YYAMDRDKRF DRVRLAYDVL VSGKGESAAD AASAVSQFYD SKDKGDEFVL
PTAIAGYDGM KDGDGVFMVN YRSDRAREIT QALLDPTFDG FERQPPHFAG ALAMTEYSTA
HNAFMDVLFG PESLNNILGQ VVSEAGMTQL RIAETEKYAH VTFFFNGGRE TSFPGEERIL
IPSPKVATYD LQPEMSAPEL TDRLVEVIDA GRFDVIIVNY ANGDMVGHSG ILEAAIKAVE
AVDGCLGRVE EAVVRAGGTM LVTADHGNAE LMRDPVTGEP HTAHTTGRVD LLLVNGPEGA
SLADGRLADL SPTLLALIGL PQPAEMTGKT LVAKAAVAVG ASH
|
|---|
| |