| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1204 |
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| Symbol | sdhA |
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| ID | 3833702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1420795 |
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| End bp | 1422579 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637825293 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_426292 |
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| Protein GI | 83592540 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.431605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCCT ACGAGATTGT CGACCACGAA TATGATGCTT TGGTCGTTGG CGCCGGTGGC
GCCGGCCTGC GCGCCACCTT CGGTCTGGTC GAACAGGGCC TCAAGACCGC CTGCATCACC
AAGGTCTTCC CCACCCGCTC CCATACCGTG GCCGCCCAGG GCGGCATCGG CGCCGCCCTT
GGCAATATGG CCGAGGACAA TTGGAAGTGG CATATGTACG ATACCGTCAA GGGCGCCGAC
TGGCTCGGCG ACCAGGACGC CATCGAATAT ATGTGCCGCG AGGCGATTCC GGCGGTTTAC
GAGCTTGAGC ACTACGGCGT GCCCTTCTCG CGCACCGAAG ACGGCCGCAT CTATCAGCGG
CCTTTCGGCG GCCATATGCG CAACTTCGGC GAGGCACCGG TTCAGCGCGC CTGCGCCGCC
GCCGACCGCA CCGGCCACGC CATTTTGCAG ACCCTCTATC AACAGTCTCT GCGCTTCAAC
GCCGAGTTCT TCGTTGAATA CTTCGCCCTT GATCTGATCA TCGAGGACGG GGTCTGTCGT
GGCGTGATCG CTTGGTGCAT GGAAGACGGC ACCATCCACC GCTTCAAGTC CCATACCACG
GTGCTGGCCA CCGGCGGCTA TGGCCGCGCC TATTTCTCGT GTACCTCGGC CCATACCTGT
ACGGGCGATG GCAACGGCAT GGTCGCCCGC GCCGGTCTGC CGCTCCAGGA CATGGAATTC
GTGCAGTTCC ACCCCACCGG CATCTATGGG GCGGGCTGCC TGATCACCGA GGGCGCGCGC
GGCGAGGGTG GTTACCTGAC CAATTCGGAA GGCGAGCGCT TCATGGAGCG CTATGCCCCC
ACCGCCAAGG ATCTGGCCAG CCGCGACGTG GTCAGCCGGG CGATGACGGT GGAAATCCGC
GAGGGCCGGG GCGTCGGTCC GAAGAAGGAC CACATCAACC TGCACCTCGA ACACCTGGGC
CCCGAGGTTC TGCATTCCCG GCTGCCCGGC ATCACCGAGA CCGCCAAGGT CTTCTCGGGT
GTCGACGCCA CCCGCGATCC GATCCCGGTG CTGCCCACCG TCCACTACAA CATGGGCGGC
ATTCCGACCA ATTATCACGG CGAGGTGCTG AACCCGACCA AGGCCGATCC CGAGGCGATC
TTCCCCGGGC TGATGGCCGT TGGCGAATGC GCCTGCGTGT CGGTGCATGG CGCCAACCGC
CTGGGCACCA ACTCGCTGCT CGACATCGTG GTCTTCGGCC GCGCCGCCGC GCTGCGCGCC
GCCGAGGTGG TCAAGCCCGG CATCGCCCAC AAGCCGCTCA AGGCCGATGC CGCCGATCTG
GCGCTGTCGC GTCTTGATCG TCTGCGCAGC GCCAAGGGCG CGAAGCTGAC CGCCGAGATC
CGCGACGACC TGCAGCAGGC CATGCAGCGC GACGCCGCGG TGTTCCGCAC CACCAAGTCG
TTGGCCGAGG GCGTCGCCCG CGTCGATCAG GTCGCCGCCA GCCTCGCCGA TATCAAGCTT
GTCGACACCT CGATGATCTT CAATACGGAT CTCGCCGAGG CGCTCGAACT CGAAAATCTG
ATGGCCTGCG CTCAGACCAC CATCCATGGG GCGGCGGCGC GCCAGGAAAG CCGGGGCGCC
CACGCCCATG AGGATTTCCC CGATCGCGAC GACAAGACCT GGATGAAGCA CACCCTCGCC
TGGCTCGACC CCAAGGGCAA GGTCACGCTG GACTACCGTC CGGTTCACAC CTTCACCCTG
ACCGACGAGA TCGACTACAT CGAACCCAAG GCGCGCGTGT ACTGA
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| Protein sequence | MASYEIVDHE YDALVVGAGG AGLRATFGLV EQGLKTACIT KVFPTRSHTV AAQGGIGAAL
GNMAEDNWKW HMYDTVKGAD WLGDQDAIEY MCREAIPAVY ELEHYGVPFS RTEDGRIYQR
PFGGHMRNFG EAPVQRACAA ADRTGHAILQ TLYQQSLRFN AEFFVEYFAL DLIIEDGVCR
GVIAWCMEDG TIHRFKSHTT VLATGGYGRA YFSCTSAHTC TGDGNGMVAR AGLPLQDMEF
VQFHPTGIYG AGCLITEGAR GEGGYLTNSE GERFMERYAP TAKDLASRDV VSRAMTVEIR
EGRGVGPKKD HINLHLEHLG PEVLHSRLPG ITETAKVFSG VDATRDPIPV LPTVHYNMGG
IPTNYHGEVL NPTKADPEAI FPGLMAVGEC ACVSVHGANR LGTNSLLDIV VFGRAAALRA
AEVVKPGIAH KPLKADAADL ALSRLDRLRS AKGAKLTAEI RDDLQQAMQR DAAVFRTTKS
LAEGVARVDQ VAASLADIKL VDTSMIFNTD LAEALELENL MACAQTTIHG AAARQESRGA
HAHEDFPDRD DKTWMKHTLA WLDPKGKVTL DYRPVHTFTL TDEIDYIEPK ARVY
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