| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1158 |
|---|
| Symbol | |
|---|
| ID | 3834668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1372885 |
|---|
| End bp | 1375578 |
|---|
| Gene Length | 2694 bp |
|---|
| Protein Length | 897 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637825247 |
|---|
| Product | osmosensitive K+ channel Signal transduction histidine kinase |
|---|
| Protein accession | YP_426246 |
|---|
| Protein GI | 83592494 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCCG CTGATCGCGA AAACCGCCCC TCGCCCGATG CCCTGCTGGC CGAAGCCCAC
CGGGAAGGCC GGGGCAAGCT GAAGATATTC CTGGGGGCGG CGCCGGGGGT GGGGAAAACC
TACGCCATGC TTGAAGCCGC CCGCGAGCGG GCGCGCGATG GCGTCGACGT GGCGGTGGCG
GTGGTCGAAA CCCATGGCCG GCGCGAGACC GAGGCCCTGG TCCATGGCCT GGACGTCGTT
CCCAAGCGCA CGCTCGAGTA TCGCGGCCGC GACTTCGAGG AAATGGACCT TGATGGCGTT
CTCGCCCGCC GGCCGGCCCT GGCCCTGGTC GATGAGCTGG CCCATACCAA CATCTCGGGC
AGCCGCCATC TCAAGCGCTG GCAGGATGTC CAGGAACTGC TCGATGTCGG CATCGATGTT
TACACCACCC TGAACGTCCA GCACCTGGAA AGCCTCAACG ACGTGGTCGA GCGGATTTCC
GGGGTGCGGG TCCGCGAAAC CCTGCCCGAT TCCGTTTTGC AGCAGGCCGA CGAGATCAAG
CTGATCGATC TGGCGCCCGA GGATCTGCTC AAACGCCTGG AGGAGGGCAA GGTCTATGTG
CCCGATCAGG CGCGGCGGGC GGCCAACGCC TTCTTCTCGC GCGGCAATCT GACGGCGCTG
CGCGAAATGG CCCTGCGTCA GGCGGCCGAG CGCGTCGACG CCCAGATGAT CAGTTATATG
CACGCCCACG CCATCCAGGG GCCCTGGCCG GCGCGCGAGC GGCTGATGGC CTGTATCGGC
GATGATCTGG CGGCCGAAAG CGTCGTGCGG CTGGCGGCGC GTTCGGCCGA GCGCCGGCAG
GCGCCGTGGA TCGCCGTCTA TATCGAAACC GCCCGCCACT TGTCGCTGTC GGAAGAGGTG
AAGGACCGCA TCGCCCGCGC CCTGCGTCTG GCCGAGGAAC TGGGCGGCGA GGCGACGACG
GTTCAGGGCG ATGACGTGGT GGCCGAGGTC TTGTCTTTCG CCAAGGCCCG CAATATCACC
CAGATCATCA TCGGCCGCCC TCGGCGCCAC CGTCAGCGCT GGTTTGGCGG CGGCGATACG
GCCAAGGCCC TGCTCGCCCG GGCCGAGGCC TTCAATGTGA CCGTCATCGG CCGCGAGAAC
GCCAGCCCCT CGCCGATCGC CCGCATCCGC CGCGACATGC CCAAGGACTG GCTTGGCTAT
GGATTGGCCA CCCTGGCGGT CGCCCTGGCC ACCGGTTTTA GCGTGCTGAT CGACATGTGG
ATGCCCGTGC CCAACATCTC GGTCGCCTAT CTGATGGCCG TGCTGCTGGT CGCCATGCGT
CTTGGCCTCG CGCCGTCGAT CTTCGCCTCG CTGCTCAGTT TCCTGATTTA TTCGTTCCTG
TTCACCGAGC CGCGGCTGAC CCTGGCCATC ACCGATTCCC ATAACATCCT GACCATGGTG
TTCTTCCTGG TCGCCGCGGT GATCGTGTCG AACCTGGGCA GTCGGCTGCG CGAGCAGGTT
CAGGCGACCC GGCTGTCGGC CCGGCGCACC GGCACCCTTT ATGATTTCAG CCGCAAGATC
GCCGCCGCCG CCACCCAGGA CGACGTGCTG TGGGCGGTGG TCCACCATGT GGCCTCGACC
ATTCACGGCC AGTCGCTGAT CCTTTTGCCC GAAAACGACC GTTTGGCGAT CAAGGCCGGC
TATCCGCCCG AGGACACCCT GGACGACAAG GCCGCCGCCG CCGCCGAATG GGCTTGGACC
CACGGCACCC GCGCCGGCGC CGGTTCGGCC ACCCTGCCAA CCTCGCCCTG GCTGTTCCTG
CCGCTCAAAA CCGTGCGCGG CCCGGTGGGG GTGATGGGGG TGCAGATGGC CGGCGCCGGC
ATTCCCCCGC CCAGCGAGGC CCGGTTGCTG GAAACCCTGG CCGATCAGGC GGCGGTGGCG
ATCGAACGCA CCGCCCTGGT CGCCGATATC GAGGCGGCGC GGGTCGCCGG CGAGCGCGAT
CGCCTGCGCA CCGCCTTGCT GTCGTCGTTG TCCCATGATC TGCGCACGCC GCTGGTCTCG
ATCATGGGCT CGGCCAGCGC CCTGGTGAAC TACCAAGACA CCCTGTCCGA CGACGCCGAA
CGCGAATTGG CCCTGACCAT CCAGGACGAG GCCGAGCGCC TGAACCGCTT CGTGCAGAAC
CTGCTCGATA TGACCAAACT GGGCGCCGGC GCCCTCAAGC CCCGGATCGA TTGGGCCGAT
TTCCGTGATA TCGTCGGCGG CGCCCTTGAA CGGGCCAAGC GGCTGATCGG TCAGCGCAAG
GTGCGGATCG ACCTCAGCGA TGATTTTCCG CTGCTGTGCG TTGATTCCGT GCTGATGGAA
CAGGTGGTCT TCAACCTGAT CGACAACGCC TGCAAATACA CGCCGCCGGG CAGCGCCATC
ACCGTTTGGG GGCGGCCGCG CCGCGACAAG GTGGTGGTCG AGATCTGCGA TCAGGGCCCG
GGCATTCCCG AGGCCGACCG CGAGCAGGTG TTTGACATGT TCTACCGGGT CAAGGCCCAG
GATGCCCAGA TCGCCGGCAC CGGCCTTGGT CTGGCCATCT GCCGGGGACT GGTCGAGGCC
CATGGCGGAA CGATCGCCGC CGAGCCCGGC ATCAATGATT GCGGAACCTG CATCGTCATC
ACCTTGCCGC TGCTGGTCGA GCCCGAACTG CTTGGCGCCG AGGAGAAGGT TTGA
|
|---|
| Protein sequence | MAPADRENRP SPDALLAEAH REGRGKLKIF LGAAPGVGKT YAMLEAARER ARDGVDVAVA
VVETHGRRET EALVHGLDVV PKRTLEYRGR DFEEMDLDGV LARRPALALV DELAHTNISG
SRHLKRWQDV QELLDVGIDV YTTLNVQHLE SLNDVVERIS GVRVRETLPD SVLQQADEIK
LIDLAPEDLL KRLEEGKVYV PDQARRAANA FFSRGNLTAL REMALRQAAE RVDAQMISYM
HAHAIQGPWP ARERLMACIG DDLAAESVVR LAARSAERRQ APWIAVYIET ARHLSLSEEV
KDRIARALRL AEELGGEATT VQGDDVVAEV LSFAKARNIT QIIIGRPRRH RQRWFGGGDT
AKALLARAEA FNVTVIGREN ASPSPIARIR RDMPKDWLGY GLATLAVALA TGFSVLIDMW
MPVPNISVAY LMAVLLVAMR LGLAPSIFAS LLSFLIYSFL FTEPRLTLAI TDSHNILTMV
FFLVAAVIVS NLGSRLREQV QATRLSARRT GTLYDFSRKI AAAATQDDVL WAVVHHVAST
IHGQSLILLP ENDRLAIKAG YPPEDTLDDK AAAAAEWAWT HGTRAGAGSA TLPTSPWLFL
PLKTVRGPVG VMGVQMAGAG IPPPSEARLL ETLADQAAVA IERTALVADI EAARVAGERD
RLRTALLSSL SHDLRTPLVS IMGSASALVN YQDTLSDDAE RELALTIQDE AERLNRFVQN
LLDMTKLGAG ALKPRIDWAD FRDIVGGALE RAKRLIGQRK VRIDLSDDFP LLCVDSVLME
QVVFNLIDNA CKYTPPGSAI TVWGRPRRDK VVVEICDQGP GIPEADREQV FDMFYRVKAQ
DAQIAGTGLG LAICRGLVEA HGGTIAAEPG INDCGTCIVI TLPLLVEPEL LGAEEKV
|
|---|
| |