Gene Rru_A1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1122 
Symbol 
ID3833429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1323541 
End bp1324518 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID637825211 
ProductBeta-lactamase-like 
Protein accessionYP_426210 
Protein GI83592458 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATC ACTTCGACGG AACGCGTTTT TTCAATCCGG GACGCCCGGA AAACCTCGGG 
ATAGGATCTT TCCTGCGCTG GCGGTGGAGC CGCCGACCCG AACCCTGGCC CACCCATATC
GACGAGCCGG TCGCCCCGGC CCCGCTGGCG GCGGTGGGCA AGGATCGCCT GCGCTTTAGT
TTCATCGGTC AGGCCAGCGT GCTGATCCAG ACCAACGGGC TGAATATCCT GACCGATCCG
GTGTTTTCCG AGCGGGCGAG CCCGCTGCCG TGGGTCGGGC CAAAGCGGGT GCGCGCCCCG
GGCATCGCCC TGGACGCCCT GCCGCCGATC CATGCCATTT TGCTTAGCCA TAACCATTAC
GACCACATGG ATCTTGCCAG CTTGCGCGCC CTGGCCAAGC GCTGGGGCGC GCCGATCCTG
ACTGGCCTGG GCAACACGCG CTATCTTGGC CGACGCGGTG TTCCCGGCGG CATCGATCTG
GACTGGTGGC AGGCCCATAG CCTGGAGAAC GGCACCGAGA TCACCTTCGT ACCGGCCCAG
CATTGGTCCA AGCGCGGTCT GTTTGACGGA CGCAAAACGC TGTGGGGCGG TTTTTTCATC
AACGCTCCGG CCGGATCGGT CTATTTCGCC GGCGACACCG GCTATCCCGG CCCCTTCCGC
GCCATCCGCC ACCGCCTGTG GTCGCCCGAT GTCGCCCTGC TACCGATCGG CGCCTATGCG
CCGCGTTGGT TCATGGGCGA GCATCACATG GACCCCGAGG AGGCGGTGGC GGCCTTTGAC
GAGCTTGGGG CGCGGGCCGC CCTCGCCCTG CATACCGGCA CCTTCGCCCT GGCCGACGAG
GGGATCGACG CCCCGGCCCA GGCTTTGACC AAGGCCCTGG CGCGCAAGGC CATCCCCAGC
ACGCGCTTCG TGCCGCCGCC CTTCGGCTTT GCGCTGGAAT GGACGCCCGA GACGGGGATT
TCGCCCGCTT CGTCTTGA
 
Protein sequence
MSDHFDGTRF FNPGRPENLG IGSFLRWRWS RRPEPWPTHI DEPVAPAPLA AVGKDRLRFS 
FIGQASVLIQ TNGLNILTDP VFSERASPLP WVGPKRVRAP GIALDALPPI HAILLSHNHY
DHMDLASLRA LAKRWGAPIL TGLGNTRYLG RRGVPGGIDL DWWQAHSLEN GTEITFVPAQ
HWSKRGLFDG RKTLWGGFFI NAPAGSVYFA GDTGYPGPFR AIRHRLWSPD VALLPIGAYA
PRWFMGEHHM DPEEAVAAFD ELGARAALAL HTGTFALADE GIDAPAQALT KALARKAIPS
TRFVPPPFGF ALEWTPETGI SPASS