| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1057 |
|---|
| Symbol | |
|---|
| ID | 3833518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1251265 |
|---|
| End bp | 1252044 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637825146 |
|---|
| Product | 3-hydroxybutyrate dehydrogenase |
|---|
| Protein accession | YP_426145 |
|---|
| Protein GI | 83592393 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.660829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA AATGCGCAGT GGTGACCGGG TCGACCAGCG GAATCGGCCT TGGCATCGCC
CGGGCCCTGG CCGGGCAGGG CGTCGATATC GTGTTGAACG GCTTCGGGGC GCCCGAGGCG
ATCGAGGATA TCCGCAAGGA CATCGAGACC AGTTTTTCGG TGCGCGCCAT CCATATCGAC
GCCGATCTGG CGCAGGGCGA GGCCTGCCGC GCTCTAATCG CTCAGGCGAT CGCCGAAATG
GGGCAGGTCG ATATCCTGGT CAATAACGCC GGCATTCAGC ATACCAGCGA CATCGTCGAT
TTTCCGCCCG AGCGCTGGAA TAGCGTCATC GCCATCAATC TTTCAGCGGT CTTCCATTGC
ACGGCGGCGG CCTTGCCGGG AATGCGCGAG CGCGATTGGG GGCGGGTGAT CAATGTCGCC
AGCGCCCATG GACTGGTGGC CAGCGTCGGC AAGGCCGCCT ATGTGGCGGC CAAGCACGGG
GTCCTTGGGC TGACCAAGGT CGCCGCCCTG GAAAACGCCA CCCGCCACAT CACCGTCAAC
GCCATCTGCC CGGGGTGGGT GCTGACGCCG CTGGTGCAGG CCCAGATCGA CGCCCGCGCC
GCCCGCGACG GCGTTACCGT CGAGCGGGCG ACCGTCGATT TGCTCAGCGA AAAGCAGCCG
ACGCGGCGCT TCGTCACCCC CGAGCAGATC GGCGCCATGG CGGTTTATCT GTGTTCCGAG
GCGGCCGATA CGCTGACCGG CGTGCCGTTG TCGATCGATG GCGGCTGGAC CGCGCAATAG
|
|---|
| Protein sequence | MKGKCAVVTG STSGIGLGIA RALAGQGVDI VLNGFGAPEA IEDIRKDIET SFSVRAIHID
ADLAQGEACR ALIAQAIAEM GQVDILVNNA GIQHTSDIVD FPPERWNSVI AINLSAVFHC
TAAALPGMRE RDWGRVINVA SAHGLVASVG KAAYVAAKHG VLGLTKVAAL ENATRHITVN
AICPGWVLTP LVQAQIDARA ARDGVTVERA TVDLLSEKQP TRRFVTPEQI GAMAVYLCSE
AADTLTGVPL SIDGGWTAQ
|
|---|
| |