Gene Rru_A1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1016 
Symbol 
ID3833477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1204389 
End bp1205381 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID637825105 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_426104 
Protein GI83592352 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.725697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG AGCCGGCCCC GGGCGCCGCG CCGGTGTCGC GCCCGCCCGA AATCCTGCCG 
GGCATGGCGC CTTGGCGCAT GTGGCTTGAT GCCCAGATCC GCCACAACGG CCGGCGGCTG 
GTGATCCTGG TGCCCTATGT CTGGCTGCTG CTGTTTTTCG TTCTGCCCTT CGCCATCGTC 
CTCAAGATCT CCTTTGCCGA ATTCCGCGTC GGCGTGCCGC CCTATACGGC CCTGATCGAC 
TTCACCCAGG ACGCCTATCT GCGGCTGACC CTGGCGCTGT CGAACTACAA GTACATGCTC 
GACGACGAGA TGTACGTGAT CGCCTATCTG AATTCGCTGC GCATCGCCGG CATTTCCACC 
GTGCTCGCCC TGCTGATCGG CTATCCGATG GCCTATGGCA TCGCCAGGGC GCCCAAGGGG 
CCGCGCACCA TCTTGCTGTT CCTGGTGATC TTGCCGTTCT GGACGTCGTT CCTCATCCGC 
GTCTATGCCT GGATGGGCAT CCTCAAGGGC AACGGCCTGC TCAATACCTT CCTGATCTGG 
ACCGGGGTGA TCGACCAGCC GCTGACCATC ATGGGCACGG AATGGGCGGT GTTCATCGGC 
ATCGTCTATT CCTATCTGCC CTTCATGGTG CTGCCGCTGT ACGCCACCTT GGAGAAGCTC 
GACCCCAGCT TGCTCGAAGC CGCCCACGAC CTGGGCTGCC GGCCGTGGAA GGCCTTTCTG 
ACCATCACCC TGCCGCTGTC GGTGCCGGGA ATCATCGCCG GATCGATGCT GGTGTTCATC 
CCCTCGGTCG GCGAGTTCGT CATCCCCGAA CTGCTGGGCG GGGCCGATAC CTTCATGATC 
GGCCGGGTGC TGTGGAACGA GTTCTTCCTC AACCGCGATT GGCCGGTGGC CTCGGCGGTG 
GCGGTGGCGA TGCTGCTGAT GCTGGTGGTG CCGATCATGA TCTTCCAGAA CATCCAGGCC 
AAACAGGCCG AAGCGGCGGA GGAACGGTCA TAA
 
Protein sequence
MTAEPAPGAA PVSRPPEILP GMAPWRMWLD AQIRHNGRRL VILVPYVWLL LFFVLPFAIV 
LKISFAEFRV GVPPYTALID FTQDAYLRLT LALSNYKYML DDEMYVIAYL NSLRIAGIST 
VLALLIGYPM AYGIARAPKG PRTILLFLVI LPFWTSFLIR VYAWMGILKG NGLLNTFLIW 
TGVIDQPLTI MGTEWAVFIG IVYSYLPFMV LPLYATLEKL DPSLLEAAHD LGCRPWKAFL 
TITLPLSVPG IIAGSMLVFI PSVGEFVIPE LLGGADTFMI GRVLWNEFFL NRDWPVASAV 
AVAMLLMLVV PIMIFQNIQA KQAEAAEERS